OBART12G19140 (Oryza barthii)
MBD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF01429 (MBD) IPR001739 OBART12G19140 T260747_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
OBART12G19140.1 MBD 26 117

Links

Other MBD family TFs
Other Oryza barthii TFs

37 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGIOSGA035814 Oryza indica BGIOSGA035814 N 1.000
OGLUM12G20810 Oryza glumaepatula OGLUM12G20810 N 1.000
ONIVA02G25900 Oryza nivara ONIVA02G25900 N 1.000
ORGLA12G0164400 Oryza glaberrima ORGLA12G0164400 N 1.000
ORUFI12G21360 Oryza rufipogon ORUFI12G21360 N 1.000
OS12G0620400 Oryza sativa OS12G0620400 N 1.000
LPERR12G16300 Leersia perrieri LPERR12G16300 N 0.986
OMERI12G13490 Oryza meridionalis OMERI12G13490 N 0.986
OPUNC12G17310 Oryza punctata OPUNC12G17310 N 0.972
OB12G26010 Oryza brachyantha OB12G26010 N 0.971
Pavir.Ca02859 Panicum virgatum Pavir.Ca02859 N 0.958
Pavir.J29994 Panicum virgatum Pavir.J29994 N 0.930
BRADI4G21540 Brachypodium distachyon BRADI4G21540 N 0.873
F775_32078 Aegilops tauschii F775_32078 N 0.845
Traes_5BS_19E54A2E0 Triticum aestivum Traes_5BS_19E54A2E0 N 0.845
Traes_5DS_438FF99FC Triticum aestivum Traes_5DS_438FF99FC N 0.845
TRIUR3_27778 Triticum urartu TRIUR3_27778 N 0.845
GRMZM2G022365 Zea mays GRMZM2G022365 N 0.831
GSMUA_Achr2G12870_001 Musa acuminata GSMUA_Achr2G12870_001 N 0.775
Si035862m.g Setaria italica Si035862m.g N 0.775
Pavir.Ia01134 Panicum virgatum Pavir.Ia01134 N 0.775
Pavir.Ib04134 Panicum virgatum Pavir.Ib04134 N 0.775
GRMZM2G157470 Zea mays GRMZM2G157470 N 0.761
AMTR_s00004p00169140 Amborella trichopoda AMTR_s00004p00169140 N 0.753
GSMUA_Achr7G01310_001 Musa acuminata GSMUA_Achr7G01310_001 N 0.750
Traes_5AS_BABE20FBA Triticum aestivum Traes_5AS_BABE20FBA N 0.745
evm.TU.supercontig_10.263 Carica papaya evm.TU.supercontig_10.263 N 0.738
Sb01g013320 Sorghum bicolor Sb01g013320 N 0.732
Sb08g022000 Sorghum bicolor Sb08g022000 N 0.732
gene31058-v1.0-hybrid Fragaria vesca gene31058-v1.0-hybrid N 0.732
MDP0000152128 Malus domestica MDP0000152128 N 0.732
MDP0000574053 Malus domestica MDP0000574053 N 0.732
PRUPE_ppa008789mg Prunus persica PRUPE_ppa008789mg N 0.718
VIT_11s0016g05580 Vitis vinifera VIT_11s0016g05580 N 0.718
PK04144.1 Cannabis sativa PK04144.1 N 0.718
Pm027560 Prunus mume Pm027560 N 0.712
Cucsa.132180 Cucumis sativus Cucsa.132180 N 0.704