Pavir.Ib04134 (Panicum virgatum)
MBD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF01429 (MBD) IPR001739 Pavir.Ib04134 T261605_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Ib04134.1.p MBD 19 91

Links

Other MBD family TFs
Other Panicum virgatum TFs

21 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Pavir.Ia01134 Panicum virgatum Pavir.Ia01134 N 0.986
Si035862m.g Setaria italica Si035862m.g N 0.972
GRMZM2G157470 Zea mays GRMZM2G157470 N 0.887
Sb01g013320 Sorghum bicolor Sb01g013320 N 0.831
BGIOSGA035814 Oryza indica BGIOSGA035814 N 0.775
OBART12G19140 Oryza barthii OBART12G19140 N 0.775
OGLUM12G20810 Oryza glumaepatula OGLUM12G20810 N 0.775
OMERI12G13490 Oryza meridionalis OMERI12G13490 N 0.775
ONIVA02G25900 Oryza nivara ONIVA02G25900 N 0.775
ORGLA12G0164400 Oryza glaberrima ORGLA12G0164400 N 0.775
ORUFI12G21360 Oryza rufipogon ORUFI12G21360 N 0.775
OS12G0620400 Oryza sativa OS12G0620400 N 0.775
LPERR12G16300 Leersia perrieri LPERR12G16300 N 0.761
OB12G26010 Oryza brachyantha OB12G26010 N 0.761
OPUNC12G17310 Oryza punctata OPUNC12G17310 N 0.761
Pavir.Ca02859 Panicum virgatum Pavir.Ca02859 N 0.732
Traes_5BL_8F2E81CCA Triticum aestivum Traes_5BL_8F2E81CCA N 0.729
BRADI4G21540 Brachypodium distachyon BRADI4G21540 N 0.718
F775_07994 Aegilops tauschii F775_07994 N 0.718
Pavir.J20491 Panicum virgatum Pavir.J20491 N 0.718
Pavir.J29994 Panicum virgatum Pavir.J29994 N 0.704