Lus10030108.g (Linum usitatissimum)
MBD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF01429 (MBD) IPR001739 Lus10030108.g T261547_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Lus10030108 MBD 19 86

Links

Other MBD family TFs
Other Linum usitatissimum TFs

30 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Lus10002168.g Linum usitatissimum Lus10002168.g N 0.955
Lus10043263.g Linum usitatissimum Lus10043263.g N 0.897
Lus10019406.g Linum usitatissimum Lus10019406.g N 0.884
GLYMA04G23780 Glycine max GLYMA04G23780 N 0.779
PRUPE_ppa008789mg Prunus persica PRUPE_ppa008789mg N 0.779
cassava13512.valid.m1 Manihot esculenta cassava13512.valid.m1 N 0.770
cassava13513.valid.m1 Manihot esculenta cassava13513.valid.m1 N 0.770
gene31058-v1.0-hybrid Fragaria vesca gene31058-v1.0-hybrid N 0.765
MDP0000152128 Malus domestica MDP0000152128 N 0.765
MDP0000574053 Malus domestica MDP0000574053 N 0.765
GLYMA06G30590 Glycine max GLYMA06G30590 N 0.750
Cucsa.132180 Cucumis sativus Cucsa.132180 N 0.750
PK04144.1 Cannabis sativa PK04144.1 N 0.750
evm.TU.supercontig_10.263 Carica papaya evm.TU.supercontig_10.263 N 0.738
VIT_11s0016g05580 Vitis vinifera VIT_11s0016g05580 N 0.735
Gorai.011G083900 Gossypium raimondii Gorai.011G083900 N 0.735
SapurV1A.0034s0480 Salix purpurea SapurV1A.0034s0480 N 0.735
Pm027560 Prunus mume Pm027560 N 0.726
GLYMA15G01040 Glycine max GLYMA15G01040 N 0.721
PGSC0003DMG400002913 Solanum tuberosum PGSC0003DMG400002913 N 0.721
Solyc12g009590.1 Solanum lycopersicum Solyc12g009590.1 N 0.721
Cucsa.295070 Cucumis sativus Cucsa.295070 N 0.721
chr4.CM0234.40.nc Lotus japonicus chr4.CM0234.40.nc N 0.716
cassava5958.m1 Manihot esculenta cassava5958.m1 N 0.714
AMTR_s00004p00169140 Amborella trichopoda AMTR_s00004p00169140 N 0.712
SapurV1A.1100s0070 Salix purpurea SapurV1A.1100s0070 N 0.712
cassava6704.valid.m1 Manihot esculenta cassava6704.valid.m1 N 0.706
Aquca_020_00103 Aquilegia coerulea Aquca_020_00103 N 0.706
GLYMA04G23980 Glycine max GLYMA04G23980 N 0.703
MDP0000375866 Malus domestica MDP0000375866 N 0.703