PGSC0003DMG400002913 (Solanum tuberosum)
MBD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF01429 (MBD) IPR001739 PGSC0003DMG400002913 T260851_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
PGSC0003DMT400007543 MBD 7 80

Links

Other MBD family TFs
Other Solanum tuberosum TFs

55 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Solyc12g009590.1 Solanum lycopersicum Solyc12g009590.1 N 1.000
Solyc07g008170.2 Solanum lycopersicum Solyc07g008170.2 N 0.838
MDP0000152128 Malus domestica MDP0000152128 N 0.838
MDP0000574053 Malus domestica MDP0000574053 N 0.838
MDP0000375866 Malus domestica MDP0000375866 N 0.824
Pm027560 Prunus mume Pm027560 N 0.822
chr4.CM0234.40.nc Lotus japonicus chr4.CM0234.40.nc N 0.811
evm.TU.supercontig_10.263 Carica papaya evm.TU.supercontig_10.263 N 0.810
PRUPE_ppa008789mg Prunus persica PRUPE_ppa008789mg N 0.808
cassava5958.m1 Manihot esculenta cassava5958.m1 N 0.804
TCM_038107 Theobroma cacao TCM_038107 N 0.797
gene31058-v1.0-hybrid Fragaria vesca gene31058-v1.0-hybrid N 0.784
PK04144.1 Cannabis sativa PK04144.1 N 0.784
AMTR_s00004p00169140 Amborella trichopoda AMTR_s00004p00169140 N 0.781
GLYMA04G23780 Glycine max GLYMA04G23780 N 0.781
Ca_06682 Cicer arietinum Ca_06682 N 0.781
GLYMA04G23980 Glycine max GLYMA04G23980 N 0.770
GLYMA06G25310 Glycine max GLYMA06G25310 N 0.770
GLYMA06G30590 Glycine max GLYMA06G30590 N 0.770
orange1.1g022412m.g Citrus sinensis orange1.1g022412m.g N 0.770
Aquca_020_00103 Aquilegia coerulea Aquca_020_00103 N 0.767
POPTR_0018s12980 Populus trichocarpa POPTR_0018s12980 N 0.759
Ciclev10010753m.g Citrus clementina Ciclev10010753m.g N 0.759
GLYMA06G30350 Glycine max GLYMA06G30350 N 0.757
cassava13512.valid.m1 Manihot esculenta cassava13512.valid.m1 N 0.757
cassava13513.valid.m1 Manihot esculenta cassava13513.valid.m1 N 0.757
GLYMA13G44230 Glycine max GLYMA13G44230 N 0.753
GLYMA15G01040 Glycine max GLYMA15G01040 N 0.753
SapurV1A.0034s0480 Salix purpurea SapurV1A.0034s0480 N 0.753
SapurV1A.1100s0070 Salix purpurea SapurV1A.1100s0070 N 0.753
MTR_4g114770 Medicago truncatula MTR_4g114770 N 0.750
VIT_09s0002g06870 Vitis vinifera VIT_09s0002g06870 N 0.750
MTR_0339s0010 Medicago truncatula MTR_0339s0010 N 0.745
29841.m002855 Ricinus communis 29841.m002855 N 0.743
MTR_0339s0020 Medicago truncatula MTR_0339s0020 N 0.736
MTR_4g114785 Medicago truncatula MTR_4g114785 N 0.736
TCM_027169 Theobroma cacao TCM_027169 N 0.736
PRUPE_ppa009989mg Prunus persica PRUPE_ppa009989mg N 0.730
VIT_11s0016g05580 Vitis vinifera VIT_11s0016g05580 N 0.730
Ciclev10025929m.g Citrus clementina Ciclev10025929m.g N 0.730
Gorai.011G083900 Gossypium raimondii Gorai.011G083900 N 0.730
PK24888.1 Cannabis sativa PK24888.1 N 0.730
orange1.1g022816m.g Citrus sinensis orange1.1g022816m.g N 0.726
Lus10019406.g Linum usitatissimum Lus10019406.g N 0.725
MDP0000301302 Malus domestica MDP0000301302 N 0.724
Lus10030108.g Linum usitatissimum Lus10030108.g N 0.721
cassava6704.valid.m1 Manihot esculenta cassava6704.valid.m1 N 0.716
MBD11 Arabidopsis lyrata scaffold_301848.1 N 0.712
Cucsa.105420 Cucumis sativus Cucsa.105420 N 0.712
Bo8g066360 Brassica oleracea Bo8g066360 N 0.703
Bra016665 Brassica rapa Bra016665 N 0.703
Ca_19192 Cicer arietinum Ca_19192 N 0.703
Cla012920 Citrullus lanatus Cla012920 N 0.703
Gorai.006G101100 Gossypium raimondii Gorai.006G101100 N 0.703
Gorai.009G016600 Gossypium raimondii Gorai.009G016600 N 0.703