PK24888.1 (Cannabis sativa)
MBD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF01429 (MBD) IPR001739 PK24888.1 T261664_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
PK24888.1 MBD 22 95

Links

Other MBD family TFs
Other Cannabis sativa TFs

44 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bo8g066360 Brassica oleracea Bo8g066360 N 0.797
Bra016665 Brassica rapa Bra016665 N 0.797
MBD10 Arabidopsis thaliana AT1G15340 N 0.784
MBD10 Arabidopsis lyrata fgenesh1_pm.C_scaffold_1001305 N 0.784
GLYMA15G01040 Glycine max GLYMA15G01040 N 0.784
cassava6704.valid.m1 Manihot esculenta cassava6704.valid.m1 N 0.784
Gorai.011G083900 Gossypium raimondii Gorai.011G083900 N 0.784
Thhalv10007967m.g Eutrema salsugineum Thhalv10007967m.g N 0.784
VIT_09s0002g06870 Vitis vinifera VIT_09s0002g06870 N 0.770
Ca_19192 Cicer arietinum Ca_19192 N 0.770
Cla012920 Citrullus lanatus Cla012920 N 0.770
Cucsa.096390 Cucumis sativus Cucsa.096390 N 0.770
Gorai.006G101100 Gossypium raimondii Gorai.006G101100 N 0.770
orange1.1g022816m.g Citrus sinensis orange1.1g022816m.g N 0.767
GLYMA13G44230 Glycine max GLYMA13G44230 N 0.757
PRUPE_ppa009989mg Prunus persica PRUPE_ppa009989mg N 0.757
29841.m002855 Ricinus communis 29841.m002855 N 0.757
Bostr.7128s0147 Boechera stricta Bostr.7128s0147 N 0.757
Cagra.2238s0088 Capsella grandiflora Cagra.2238s0088 N 0.757
Carubv10009517m.g Capsella rubella Carubv10009517m.g N 0.757
Ciclev10025929m.g Citrus clementina Ciclev10025929m.g N 0.757
MBD11 Arabidopsis thaliana AT3G15790 N 0.743
GLYMA04G23780 Glycine max GLYMA04G23780 N 0.743
MBD11 Arabidopsis lyrata scaffold_301848.1 N 0.743
TCM_027169 Theobroma cacao TCM_027169 N 0.743
gene15686-v1.0-hybrid Fragaria vesca gene15686-v1.0-hybrid N 0.743
PGSC0003DMG400002913 Solanum tuberosum PGSC0003DMG400002913 N 0.730
Solyc12g009590.1 Solanum lycopersicum Solyc12g009590.1 N 0.730
Cla015614 Citrullus lanatus Cla015614 N 0.730
cassava13512.valid.m1 Manihot esculenta cassava13512.valid.m1 N 0.730
cassava13513.valid.m1 Manihot esculenta cassava13513.valid.m1 N 0.730
Aquca_020_00103 Aquilegia coerulea Aquca_020_00103 N 0.730
GLYMA04G23980 Glycine max GLYMA04G23980 N 0.716
GLYMA06G25310 Glycine max GLYMA06G25310 N 0.716
Solyc06g068140.2 Solanum lycopersicum Solyc06g068140.2 N 0.716
TCM_038107 Theobroma cacao TCM_038107 N 0.716
Cucsa.105420 Cucumis sativus Cucsa.105420 N 0.716
MDP0000248422 Malus domestica MDP0000248422 N 0.716
Bra021136 Brassica rapa Bra021136 N 0.703
GLYMA06G30350 Glycine max GLYMA06G30350 N 0.703
GLYMA06G30590 Glycine max GLYMA06G30590 N 0.703
Bostr.28625s0113 Boechera stricta Bostr.28625s0113 N 0.703
gene31058-v1.0-hybrid Fragaria vesca gene31058-v1.0-hybrid N 0.703
PK04144.1 Cannabis sativa PK04144.1 N 0.703