Bra021136 (Brassica rapa)
MBD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF01429 (MBD) IPR001739 Bra021136 T259954_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Bra021136.1-P MBD 4 77

Links

Other MBD family TFs
Other Brassica rapa TFs

25 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
MBD11 Arabidopsis thaliana AT3G15790 N 0.918
MBD11 Arabidopsis lyrata scaffold_301848.1 N 0.918
Bostr.28625s0113 Boechera stricta Bostr.28625s0113 N 0.905
Bra027207 Brassica rapa Bra027207 N 0.838
evm.TU.supercontig_10.263 Carica papaya evm.TU.supercontig_10.263 N 0.810
TCM_027169 Theobroma cacao TCM_027169 N 0.778
Gorai.011G083900 Gossypium raimondii Gorai.011G083900 N 0.770
Gorai.006G101100 Gossypium raimondii Gorai.006G101100 N 0.757
Cagra.2238s0088 Capsella grandiflora Cagra.2238s0088 N 0.743
Carubv10009517m.g Capsella rubella Carubv10009517m.g N 0.743
MBD10 Arabidopsis thaliana AT1G15340 N 0.730
Bo8g066360 Brassica oleracea Bo8g066360 N 0.730
Bra016665 Brassica rapa Bra016665 N 0.730
MBD10 Arabidopsis lyrata fgenesh1_pm.C_scaffold_1001305 N 0.730
Ca_19192 Cicer arietinum Ca_19192 N 0.730
Bostr.7128s0147 Boechera stricta Bostr.7128s0147 N 0.730
GLYMA13G44230 Glycine max GLYMA13G44230 N 0.726
Bo1g126020 Brassica oleracea Bo1g126020 N 0.721
Bo5g126640 Brassica oleracea Bo5g126640 N 0.720
Thhalv10007967m.g Eutrema salsugineum Thhalv10007967m.g N 0.716
Ca_06682 Cicer arietinum Ca_06682 N 0.712
VIT_09s0002g06870 Vitis vinifera VIT_09s0002g06870 N 0.708
GLYMA15G01040 Glycine max GLYMA15G01040 N 0.703
29841.m002855 Ricinus communis 29841.m002855 N 0.703
PK24888.1 Cannabis sativa PK24888.1 N 0.703