Bra027207 (Brassica rapa)
MBD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF01429 (MBD) IPR001739 Bra027207 T259956_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Bra027207.1-P MBD 129 198

Links

Other MBD family TFs
Other Brassica rapa TFs

23 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
MBD11 Arabidopsis lyrata scaffold_301848.1 N 0.890
MBD11 Arabidopsis thaliana AT3G15790 N 0.863
Bra021136 Brassica rapa Bra021136 N 0.838
Bostr.28625s0113 Boechera stricta Bostr.28625s0113 N 0.838
Bo5g126640 Brassica oleracea Bo5g126640 N 0.800
evm.TU.supercontig_10.263 Carica papaya evm.TU.supercontig_10.263 N 0.786
TCM_027169 Theobroma cacao TCM_027169 N 0.764
Bo8g066360 Brassica oleracea Bo8g066360 N 0.743
Bra016665 Brassica rapa Bra016665 N 0.743
MBD10 Arabidopsis lyrata fgenesh1_pm.C_scaffold_1001305 N 0.743
Gorai.011G083900 Gossypium raimondii Gorai.011G083900 N 0.729
Thhalv10007967m.g Eutrema salsugineum Thhalv10007967m.g N 0.729
PGSC0003DMG400028533 Solanum tuberosum PGSC0003DMG400028533 N 0.726
Solyc06g068140.2 Solanum lycopersicum Solyc06g068140.2 N 0.726
VIT_09s0002g06870 Vitis vinifera VIT_09s0002g06870 N 0.722
PRUPE_ppa009989mg Prunus persica PRUPE_ppa009989mg N 0.716
29841.m002855 Ricinus communis 29841.m002855 N 0.716
MBD10 Arabidopsis thaliana AT1G15340 N 0.703
Ca_19192 Cicer arietinum Ca_19192 N 0.703
Cla012920 Citrullus lanatus Cla012920 N 0.703
Cucsa.096390 Cucumis sativus Cucsa.096390 N 0.703
Gorai.006G101100 Gossypium raimondii Gorai.006G101100 N 0.703
cassava6704.valid.m1 Manihot esculenta cassava6704.valid.m1 N 0.700