29841.m002855 (Ricinus communis)
MBD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF01429 (MBD) IPR001739 29841.m002855 T261326_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
29841.m002855 MBD 4 77

Links

Other MBD family TFs
Other Ricinus communis TFs

45 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
cassava6704.valid.m1 Manihot esculenta cassava6704.valid.m1 N 0.892
TCM_027169 Theobroma cacao TCM_027169 N 0.851
Gorai.011G083900 Gossypium raimondii Gorai.011G083900 N 0.851
Gorai.006G101100 Gossypium raimondii Gorai.006G101100 N 0.838
Ciclev10025929m.g Citrus clementina Ciclev10025929m.g N 0.824
orange1.1g022816m.g Citrus sinensis orange1.1g022816m.g N 0.822
GLYMA13G44230 Glycine max GLYMA13G44230 N 0.797
VIT_09s0002g06870 Vitis vinifera VIT_09s0002g06870 N 0.797
PRUPE_ppa009989mg Prunus persica PRUPE_ppa009989mg N 0.784
Ca_19192 Cicer arietinum Ca_19192 N 0.784
Bo8g066360 Brassica oleracea Bo8g066360 N 0.770
Bra016665 Brassica rapa Bra016665 N 0.770
GLYMA15G01040 Glycine max GLYMA15G01040 N 0.770
MBD10 Arabidopsis thaliana AT1G15340 N 0.757
MBD10 Arabidopsis lyrata fgenesh1_pm.C_scaffold_1001305 N 0.757
Aquca_020_00103 Aquilegia coerulea Aquca_020_00103 N 0.757
Bostr.7128s0147 Boechera stricta Bostr.7128s0147 N 0.757
Cagra.2238s0088 Capsella grandiflora Cagra.2238s0088 N 0.757
Carubv10009517m.g Capsella rubella Carubv10009517m.g N 0.757
Thhalv10007967m.g Eutrema salsugineum Thhalv10007967m.g N 0.757
PK24888.1 Cannabis sativa PK24888.1 N 0.757
PGSC0003DMG400002913 Solanum tuberosum PGSC0003DMG400002913 N 0.743
Solyc12g009590.1 Solanum lycopersicum Solyc12g009590.1 N 0.743
Cla012920 Citrullus lanatus Cla012920 N 0.743
GLYMA06G30590 Glycine max GLYMA06G30590 N 0.730
Cucsa.096390 Cucumis sativus Cucsa.096390 N 0.730
Bostr.28625s0113 Boechera stricta Bostr.28625s0113 N 0.730
MDP0000248422 Malus domestica MDP0000248422 N 0.730
Pm013666 Prunus mume Pm013666 N 0.729
MBD11 Arabidopsis lyrata scaffold_301848.1 N 0.726
MBD11 Arabidopsis thaliana AT3G15790 N 0.716
Bra027207 Brassica rapa Bra027207 N 0.716
GLYMA04G23780 Glycine max GLYMA04G23780 N 0.716
gene15686-v1.0-hybrid Fragaria vesca gene15686-v1.0-hybrid N 0.716
MDP0000152128 Malus domestica MDP0000152128 N 0.716
MDP0000375866 Malus domestica MDP0000375866 N 0.716
MDP0000574053 Malus domestica MDP0000574053 N 0.716
chr4.CM0234.40.nc Lotus japonicus chr4.CM0234.40.nc N 0.716
Bra021136 Brassica rapa Bra021136 N 0.703
GLYMA04G23980 Glycine max GLYMA04G23980 N 0.703
GLYMA06G25310 Glycine max GLYMA06G25310 N 0.703
VIT_11s0016g05580 Vitis vinifera VIT_11s0016g05580 N 0.703
gene31058-v1.0-hybrid Fragaria vesca gene31058-v1.0-hybrid N 0.703
orange1.1g022412m.g Citrus sinensis orange1.1g022412m.g N 0.703
PK04144.1 Cannabis sativa PK04144.1 N 0.703