VIT_09s0002g06870 (Vitis vinifera)
MBD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF01429 (MBD) IPR001739 VIT_09s0002g06870 T261193_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
VIT_09s0002g06870.t01 MBD 5 76

Links

Other MBD family TFs
Other Vitis vinifera TFs

64 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
evm.TU.supercontig_10.263 Carica papaya evm.TU.supercontig_10.263 N 0.929
cassava6704.valid.m1 Manihot esculenta cassava6704.valid.m1 N 0.833
gene15686-v1.0-hybrid Fragaria vesca gene15686-v1.0-hybrid N 0.819
Gorai.011G083900 Gossypium raimondii Gorai.011G083900 N 0.819
Pm013666 Prunus mume Pm013666 N 0.814
Bo8g066360 Brassica oleracea Bo8g066360 N 0.806
Bra016665 Brassica rapa Bra016665 N 0.806
VIT_11s0016g05580 Vitis vinifera VIT_11s0016g05580 N 0.806
Cucsa.096390 Cucumis sativus Cucsa.096390 N 0.806
PRUPE_ppa009989mg Prunus persica PRUPE_ppa009989mg N 0.797
Ca_19192 Cicer arietinum Ca_19192 N 0.797
Cla012920 Citrullus lanatus Cla012920 N 0.797
29841.m002855 Ricinus communis 29841.m002855 N 0.797
orange1.1g022816m.g Citrus sinensis orange1.1g022816m.g N 0.795
MBD10 Arabidopsis thaliana AT1G15340 N 0.792
MBD10 Arabidopsis lyrata fgenesh1_pm.C_scaffold_1001305 N 0.792
GLYMA15G01040 Glycine max GLYMA15G01040 N 0.792
TCM_027169 Theobroma cacao TCM_027169 N 0.792
Gorai.006G101100 Gossypium raimondii Gorai.006G101100 N 0.792
Thhalv10007967m.g Eutrema salsugineum Thhalv10007967m.g N 0.792
PK04144.1 Cannabis sativa PK04144.1 N 0.792
Ciclev10025929m.g Citrus clementina Ciclev10025929m.g N 0.784
GLYMA13G44230 Glycine max GLYMA13G44230 N 0.781
GLYMA04G23780 Glycine max GLYMA04G23780 N 0.778
GLYMA06G30590 Glycine max GLYMA06G30590 N 0.778
Cagra.2238s0088 Capsella grandiflora Cagra.2238s0088 N 0.778
Carubv10009517m.g Capsella rubella Carubv10009517m.g N 0.778
PK24888.1 Cannabis sativa PK24888.1 N 0.770
cassava5958.m1 Manihot esculenta cassava5958.m1 N 0.768
Solyc06g068140.2 Solanum lycopersicum Solyc06g068140.2 N 0.764
Aquca_020_00103 Aquilegia coerulea Aquca_020_00103 N 0.764
chr3.CM0142.530.nd Lotus japonicus chr3.CM0142.530.nd N 0.763
MDP0000462461 Malus domestica MDP0000462461 N 0.759
GLYMA04G23980 Glycine max GLYMA04G23980 N 0.757
GLYMA06G25310 Glycine max GLYMA06G25310 N 0.757
MBD11 Arabidopsis lyrata scaffold_301848.1 N 0.753
Ca_06682 Cicer arietinum Ca_06682 N 0.753
PGSC0003DMG400002913 Solanum tuberosum PGSC0003DMG400002913 N 0.750
PGSC0003DMG400028533 Solanum tuberosum PGSC0003DMG400028533 N 0.750
Solyc12g009590.1 Solanum lycopersicum Solyc12g009590.1 N 0.750
MDP0000152128 Malus domestica MDP0000152128 N 0.750
MDP0000574053 Malus domestica MDP0000574053 N 0.750
TCM_038107 Theobroma cacao TCM_038107 N 0.743
Bostr.7128s0147 Boechera stricta Bostr.7128s0147 N 0.743
MDP0000248422 Malus domestica MDP0000248422 N 0.743
chr4.CM0234.40.nc Lotus japonicus chr4.CM0234.40.nc N 0.743
Cucsa.105420 Cucumis sativus Cucsa.105420 N 0.740
gene31058-v1.0-hybrid Fragaria vesca gene31058-v1.0-hybrid N 0.736
GLYMA06G30350 Glycine max GLYMA06G30350 N 0.730
AMTR_s00004p00169140 Amborella trichopoda AMTR_s00004p00169140 N 0.726
MBD11 Arabidopsis thaliana AT3G15790 N 0.726
Ciclev10010753m.g Citrus clementina Ciclev10010753m.g N 0.724
Bra027207 Brassica rapa Bra027207 N 0.722
Bostr.28625s0113 Boechera stricta Bostr.28625s0113 N 0.722
Solyc07g008170.2 Solanum lycopersicum Solyc07g008170.2 N 0.716
cassava13512.valid.m1 Manihot esculenta cassava13512.valid.m1 N 0.716
cassava13513.valid.m1 Manihot esculenta cassava13513.valid.m1 N 0.716
MDP0000375866 Malus domestica MDP0000375866 N 0.716
orange1.1g022412m.g Citrus sinensis orange1.1g022412m.g N 0.716
GSMUA_Achr2G12870_001 Musa acuminata GSMUA_Achr2G12870_001 N 0.712
Pm027560 Prunus mume Pm027560 N 0.712
Bra021136 Brassica rapa Bra021136 N 0.708
GSMUA_Achr7G01310_001 Musa acuminata GSMUA_Achr7G01310_001 N 0.708
PRUPE_ppa008789mg Prunus persica PRUPE_ppa008789mg N 0.708