MBD11 (Arabidopsis lyrata)
MBD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF01429 (MBD) IPR001739 scaffold_301848.1 T260929_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
scaffold_301848.1 MBD 5 77

Links

Other MBD family TFs
Other Arabidopsis lyrata TFs

34 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
MBD11 Arabidopsis thaliana AT3G15790 N 0.973
Bostr.28625s0113 Boechera stricta Bostr.28625s0113 N 0.959
Bra021136 Brassica rapa Bra021136 N 0.918
Bra027207 Brassica rapa Bra027207 N 0.890
TCM_027169 Theobroma cacao TCM_027169 N 0.795
MBD10 Arabidopsis thaliana AT1G15340 N 0.781
Bo8g066360 Brassica oleracea Bo8g066360 N 0.781
Bra016665 Brassica rapa Bra016665 N 0.781
MBD10 Arabidopsis lyrata fgenesh1_pm.C_scaffold_1001305 N 0.781
Gorai.011G083900 Gossypium raimondii Gorai.011G083900 N 0.781
Ca_19192 Cicer arietinum Ca_19192 N 0.767
Cagra.2238s0088 Capsella grandiflora Cagra.2238s0088 N 0.767
Carubv10009517m.g Capsella rubella Carubv10009517m.g N 0.767
Thhalv10007967m.g Eutrema salsugineum Thhalv10007967m.g N 0.767
VIT_09s0002g06870 Vitis vinifera VIT_09s0002g06870 N 0.753
Cla012920 Citrullus lanatus Cla012920 N 0.753
Cucsa.096390 Cucumis sativus Cucsa.096390 N 0.753
Bostr.7128s0147 Boechera stricta Bostr.7128s0147 N 0.753
Gorai.006G101100 Gossypium raimondii Gorai.006G101100 N 0.753
PK24888.1 Cannabis sativa PK24888.1 N 0.743
Bo8g106130 Brassica oleracea Bo8g106130 N 0.740
GLYMA15G01040 Glycine max GLYMA15G01040 N 0.740
PGSC0003DMG400028533 Solanum tuberosum PGSC0003DMG400028533 N 0.740
GLYMA13G44230 Glycine max GLYMA13G44230 N 0.726
Solyc06g068140.2 Solanum lycopersicum Solyc06g068140.2 N 0.726
29841.m002855 Ricinus communis 29841.m002855 N 0.726
AMTR_s00004p00169140 Amborella trichopoda AMTR_s00004p00169140 N 0.712
GLYMA04G23780 Glycine max GLYMA04G23780 N 0.712
PGSC0003DMG400002913 Solanum tuberosum PGSC0003DMG400002913 N 0.712
PRUPE_ppa009989mg Prunus persica PRUPE_ppa009989mg N 0.712
Solyc12g009590.1 Solanum lycopersicum Solyc12g009590.1 N 0.712
cassava6704.valid.m1 Manihot esculenta cassava6704.valid.m1 N 0.712
Ciclev10025929m.g Citrus clementina Ciclev10025929m.g N 0.712
orange1.1g022816m.g Citrus sinensis orange1.1g022816m.g N 0.712