CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Cagra.0157s0011
(
Capsella grandiflora
)
mTERF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02536 (mTERF)
IPR003690
Cagra.0157s0011
T264611_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cagra.0157s0011.1.p
mTERF
78
333
QSASDADVASSLPSLRKFLGSDGDEDGESEREMIVKALEIRRKVTKEIIKESLVRKGRFGITYATNVTDRLGNFVDHVMIEAAAMKRLPEFSESRFNLRARTVIEDSNFVPLVRWLKHNEFSYNRIAKIICMSKGNLDSIRTMIEWLKTIHVKSEFIGVAFLRSGGNILQRSREELDDIVEYLESNGLRRDWMGFVVGRCPELLSFSMEEVKRRVNFFLQMGMNQNDFGTMVFDYPKIIGYFSFEEMEKKINYLKE
Cagra.0157s0011.1.p
mTERF
288
565
VKRRVNFFLQMGMNQNDFGTMVFDYPKIIGYFSFEEMEKKINYLKEFGLSTEEVGRLLAFKPHIMGCSIEERWKPLVKYFYYLGISKEGMRRILVVKPILYCTDLEKTIAPKVRFLQEMGIPNEAIGNMLVKFPSLLTNSLYKKIRPVVIFLLTRAGVTQENIGKVIAMDPALLGCSIGTKLEPNMKYYISLGIRFHQLGEMIADFPMLLRYNVDNLRPKYRYLRRTMIRPLQDLIEFPRFFSYSLERRIIPRHTIMVQNRVNFKLRYMLACTDEEFE
Links
Other
mTERF
family TFs
Other
Capsella grandiflora
TFs
3 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
VDBG_07082
Verticillium albo atrum
VDBG_07082
N
ACRE_048410
Acremonium chrysogenum
ACRE_048410
N
CH063_08756
Colletotrichum higginsianum
CH063_08756
N
CSUB01_01124
Colletotrichum sublineola
CSUB01_01124
N
FFUJ_08009
Fusarium fujikuroi
FFUJ_08009
N
FGRRES_15994
Fusarium graminearum
FGRRES_15994
N
FPSE_01975
Fusarium pseudograminearum
FPSE_01975
N
GLRG_09233
Colletotrichum graminicola
GLRG_09233
N
MANI_026970
Metarhizium anisopliae
MANI_026970
N
NechaG94663
Fusarium solani
NechaG94663
N
PODANS_4_450
Podospora anserina
PODANS_4_450
N
VDAG_06719
Verticillium dahliae
VDAG_06719
N
VDBG_07082
Verticillium alfalfae
VDBG_07082
N
X797_011359
Metarhizium robertsii
X797_011359
N
fgenesh1_pm.sca_20_chr6_4_0000452
Nectria haematococca
fgenesh1_pm.sca_20_chr6_4_0000452
N