CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Cagra.1632s0011
(
Capsella grandiflora
)
mTERF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02536 (mTERF)
IPR003690
Cagra.1632s0011
T264624_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cagra.1632s0011.1.p
mTERF
100
264
LALFKDHGFTNDQITTVIKSFPRILSLSPEAVISPKLMFFSSIGFSTSDTAKLISSCPKTLSFSLEKRLIPCYDSLKSILLEEENVVKCLKRGYRCFSLKIAHCVSPRISIFRELGVPDKSIKWLVQASPFTFFSSERRFNEILNRVCSYGFDPKKAGFVHAMIA
Cagra.1632s0011.1.p
mTERF
224
376
LVQASPFTFFSSERRFNEILNRVCSYGFDPKKAGFVHAMIAFDCTSESTMERKYKLFQRFGWSKQDFVSAIMRFPNCATVSDEKIMYTMEYLVKNMGLQARDIAARPVVLGLSMEKRIKPRNQVISLLLSKGFVKKEDINYFTILKMKSSEFM
Links
Other
mTERF
family TFs
Other
Capsella grandiflora
TFs
3 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AT1G21150
Arabidopsis thaliana
AT1G21150
N
0.888
Bostr.7128s0706
Boechera stricta
Bostr.7128s0706
N
0.916
Carubv10011358m.g
Capsella rubella
Carubv10011358m.g
N
0.987