CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Carubv10011358m.g
(
Capsella rubella
)
mTERF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02536 (mTERF)
IPR003690
Carubv10011358m.g
T264646_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Carubv10011358m
mTERF
100
264
LALFKDHGFTNDQITTVIKSFPRILSLSPEAVISPKLMFFSSIGFSTSDTAKLISSCPKTLSFSLEKRLIPCYDSLKSILLEEENVVKCLKRGYRCFSLKIAHCVSPRISIFRELGVPDKSIKWLVQASPFTFFSSERRFNEILNRVCSYGFDPKKAGFVHAMIA
Carubv10011358m
mTERF
173
376
DSLKSILLEEENVVKCLKRGYRCFSLKIAHCVSPRISIFRELGVPDKSIKWLVQASPFTFFSSERRFNEILNRVCSYGFDPKKAGFVHAMIAFDCTSESTMERKYKLFQRFGWSKQDFVSAIMRFPNCATVSDEKIMYTMEYLVNNIGLQARDIAARPVVLGLSMEKRIKPRNQVISLLLSKGLVKKKDINYFTILKMKSPEFM
Links
Other
mTERF
family TFs
Other
Capsella rubella
TFs
4 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Cagra.1632s0011
Capsella grandiflora
Cagra.1632s0011
N
0.987
Bostr.7128s0706
Boechera stricta
Bostr.7128s0706
N
0.922
AT1G21150
Arabidopsis thaliana
AT1G21150
N
0.895
fgenesh1_pm.C_scaffold_1001799
Arabidopsis lyrata
fgenesh1_pm.C_scaffold_1001799
N
0.811