CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh1_pm.C_scaffold_1001799
(
Arabidopsis lyrata
)
mTERF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02536 (mTERF)
IPR003690
fgenesh1_pm.C_scaffold_1001799
T262686_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh1_pm.C_scaffold_1001799
mTERF
1131
1295
LALFKDHGFTTDQITNVIKSFPRVLSLSPDDVILPKLMFFSSIGFSTSDTAKMISSCPKMLSHSLNKRMIPCYDALKSILVEEENIVKCLKRGYRCFSLKITDCVSPRVSICRELGVPDKSIKWLVQVSPITFFSPERRFNELLNRVCSYGFDPKKAGFVHAMVA
fgenesh1_pm.C_scaffold_1001799
mTERF
1204
1407
DALKSILVEEENIVKCLKRGYRCFSLKITDCVSPRVSICRELGVPDKSIKWLVQVSPITFFSPERRFNELLNRVCSYGFDPKKAGFVHAMVAFDHTSEATMERKFELFQRFGWSKEDFVAAIMRFPNCVMVSDEKIMYTMEYLVNNIGLQARDIVARPVVLGLSMEKRIKPRNQVISLLLSKGLVKNEDINYFTILKLKSSEFM
Links
Other
mTERF
family TFs
Other
Arabidopsis lyrata
TFs
3 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AT1G21150
Arabidopsis thaliana
AT1G21150
N
0.826
Bostr.7128s0706
Boechera stricta
Bostr.7128s0706
N
0.825
Carubv10011358m.g
Capsella rubella
Carubv10011358m.g
N
0.811