CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

Cagra.8005s0017 *(Capsella grandiflora)* mTERF
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source
PF02536 (mTERF)	IPR003690	Cagra.8005s0017	T264637_2.00	JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
Cagra.8005s0017.1.p	mTERF	119	265	VTASDINQSITRYLRFHPVNEFEPFLESSGLNPTEYTHLIPSDKDFLDEEGFLLENHHVLCYSGVDPKKIGKIFIKAREVFGYETGILASKIKAYEDLGMSRYFLAKLIVCSPRILVGNMNLELGKVLKTLKSLGFDFDWVMENLSE
Cagra.8005s0017.1.p	mTERF	278	459	LSLLRDICFDEKELCGLIRKCPRLIFENSGRWTVVLAGFETKLGSSRSELCSLFQKFQQIQVEECVSNLRHCFLFLKEIEMEDDEIHKVFRSHSWWLGSCRLKKTSSLLLYLKAGKARLCQVIQENPEEMKKWTMGSKVQPLPATEEKLESKSMKAQFLLYLGYKENSQEMEKALERFCGKG
Cagra.8005s0017.1.p	mTERF	448	563	MEKALERFCGKGSELRERFNVLVSLGFKEKDVKEMVKVSPKILTQASDVLESKVNYLVNELGYPLSTLVDFPSCLKFTLQRMKLRFAMFSWLQARGKVGPKIKISTMLACSDKIFV
Cagra.8005s0017.1.p	mTERF	672	816	EDEIVRSITRFLLFHPVNEFEPFLESLGLKPSEFSHLVPCDKMFLNEDAFLLENYHVFWNYGIGREKMGKIFSEARQVFGYETGVLASKIKAYEDLGFSRLFLSKLIVCSPTILIGSMNVRLAKVMEMLKSIGFGVDWVTENLSE
Cagra.8005s0017.1.p	mTERF	829	1013	LSLLRDICVDGNELRELIRKRPRLIFEDSGEWTLILAAFETKLGSSRSELSSLFQKLPQSQSLGKCLMNLRHCFLFLKDIEMEADEISKIFRLHSSWLGRTRLKQTSTLLINLKGGKRRLCQAIQENPEEMKKWIMGLRVQPLPATRCKVDSKSKTMKTQFLLDLGYEENSEEMERALKNFRGKG
Cagra.8005s0017.1.p	mTERF	977	1117	KVDSKSKTMKTQFLLDLGYEENSEEMERALKNFRGKGSELRERFNVLVSLGFTEEVVKDMVKACPSILSQASDILESKVNYLVDELGYPLSTLITFPTCLKYTLQRMKLRFAMFSWLQARGKADPKLAVSTILVCSDKFFA

Links
Other mTERF family TFs
Other *Capsella grandiflora* TFs