CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Cagra.8005s0017
(
Capsella grandiflora
)
mTERF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02536 (mTERF)
IPR003690
Cagra.8005s0017
T264637_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cagra.8005s0017.1.p
mTERF
119
265
VTASDINQSITRYLRFHPVNEFEPFLESSGLNPTEYTHLIPSDKDFLDEEGFLLENHHVLCYSGVDPKKIGKIFIKAREVFGYETGILASKIKAYEDLGMSRYFLAKLIVCSPRILVGNMNLELGKVLKTLKSLGFDFDWVMENLSE
Cagra.8005s0017.1.p
mTERF
278
459
LSLLRDICFDEKELCGLIRKCPRLIFENSGRWTVVLAGFETKLGSSRSELCSLFQKFQQIQVEECVSNLRHCFLFLKEIEMEDDEIHKVFRSHSWWLGSCRLKKTSSLLLYLKAGKARLCQVIQENPEEMKKWTMGSKVQPLPATEEKLESKSMKAQFLLYLGYKENSQEMEKALERFCGKG
Cagra.8005s0017.1.p
mTERF
448
563
MEKALERFCGKGSELRERFNVLVSLGFKEKDVKEMVKVSPKILTQASDVLESKVNYLVNELGYPLSTLVDFPSCLKFTLQRMKLRFAMFSWLQARGKVGPKIKISTMLACSDKIFV
Cagra.8005s0017.1.p
mTERF
672
816
EDEIVRSITRFLLFHPVNEFEPFLESLGLKPSEFSHLVPCDKMFLNEDAFLLENYHVFWNYGIGREKMGKIFSEARQVFGYETGVLASKIKAYEDLGFSRLFLSKLIVCSPTILIGSMNVRLAKVMEMLKSIGFGVDWVTENLSE
Cagra.8005s0017.1.p
mTERF
829
1013
LSLLRDICVDGNELRELIRKRPRLIFEDSGEWTLILAAFETKLGSSRSELSSLFQKLPQSQSLGKCLMNLRHCFLFLKDIEMEADEISKIFRLHSSWLGRTRLKQTSTLLINLKGGKRRLCQAIQENPEEMKKWIMGLRVQPLPATRCKVDSKSKTMKTQFLLDLGYEENSEEMERALKNFRGKG
Cagra.8005s0017.1.p
mTERF
977
1117
KVDSKSKTMKTQFLLDLGYEENSEEMERALKNFRGKGSELRERFNVLVSLGFTEEVVKDMVKACPSILSQASDILESKVNYLVDELGYPLSTLITFPTCLKYTLQRMKLRFAMFSWLQARGKADPKLAVSTILVCSDKFFA
Links
Other
mTERF
family TFs
Other
Capsella grandiflora
TFs
2 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Carubv10003866m.g
Capsella rubella
Carubv10003866m.g
N
0.815
Bostr.13129s0291
Boechera stricta
Bostr.13129s0291
N
0.755