CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pavir.Aa00485
(
Panicum virgatum
)
mTERF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02536 (mTERF)
IPR003690
Pavir.Aa00485
T265031_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pavir.Aa00485.1.p
mTERF
63
358
PQALKASKSLAHLKTASNADAVLAFLAGLGLSPKEVAAVVASNPRVLCARIDRSLAPISAELRALGLSPSQIARLAQITGRYFLCRSFVSKVRFWLPIFGSPERLLQASDWNYWLLTSDLEKVVEPNVAYLKQCGLSAADIAKLLVAAPRLVTMHPEYVQDAVRRATQLGVAPGSQMFRHALSTAGCIGQEKVDAKVAVLKETLGWSQEEVNLAVSKAPRILVASEERLRRNAEFLLNEVGLPPQYIARRSVLLMYSLERRVVPRHLVLKALKEKGLVEQDRCFFNVVAPTEDKFL
Links
Other
mTERF
family TFs
Other
Panicum virgatum
TFs
16 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIOSGA031610
Oryza indica
BGIOSGA031610
N
GRMZM2G392823
Zea mays
GRMZM2G392823
N
OB10G21860
Oryza brachyantha
OB10G21860
N
OBART10G14710
Oryza barthii
OBART10G14710
N
OGLUM10G14600
Oryza glumaepatula
OGLUM10G14600
N
OMERI10G11440
Oryza meridionalis
OMERI10G11440
N
ONIVA10G16530
Oryza nivara
ONIVA10G16530
N
OPUNC10G13240
Oryza punctata
OPUNC10G13240
N
ORUFI10G15680
Oryza rufipogon
ORUFI10G15680
N
Sb01g018060
Sorghum bicolor
Sb01g018060
N
Traes_1AL_28010F812
Triticum aestivum
Traes_1AL_28010F812
N
Pavir.Ia01569
Panicum virgatum
Pavir.Ia01569
N
Pavir.Ib03599
Panicum virgatum
Pavir.Ib03599
N