Pavir.Ia01569 (Panicum virgatum)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Pavir.Ia01569 T289252_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Ia01569.1.p Myb 4 52
Pavir.Ia01569.1.p Myb 58 103

Links

Other Myb/SANT family TFs
Other Panicum virgatum TFs

17 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Traes_1AL_28010F812 Triticum aestivum Traes_1AL_28010F812 N 0.843
Pavir.Ib03599 Panicum virgatum Pavir.Ib03599 N 0.838
MLOC_72262 Hordeum vulgare MLOC_72262 N 0.804
OPUNC10G13240 Oryza punctata OPUNC10G13240 N 0.795
OB10G21860 Oryza brachyantha OB10G21860 N 0.794
BGIOSGA031610 Oryza indica BGIOSGA031610 N 0.789
OBART10G14710 Oryza barthii OBART10G14710 N 0.789
OGLUM10G14600 Oryza glumaepatula OGLUM10G14600 N 0.789
OMERI10G11440 Oryza meridionalis OMERI10G11440 N 0.789
ONIVA10G16530 Oryza nivara ONIVA10G16530 N 0.789
ORUFI10G15680 Oryza rufipogon ORUFI10G15680 N 0.789
Pavir.J36491 Panicum virgatum Pavir.J36491 N 0.784
Traes_1BL_C664E8E1E Triticum aestivum Traes_1BL_C664E8E1E N 0.743
Sb01g018060 Sorghum bicolor Sb01g018060 N 0.716
Si037244m.g Setaria italica Si037244m.g N 0.703
Traes_1DL_2714E3604 Triticum aestivum Traes_1DL_2714E3604 N 0.701
GRMZM2G392823 Zea mays GRMZM2G392823 N 0.679