Pavir.J36491 (Panicum virgatum)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Pavir.J36491 T289467_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.J36491.1.p Myb 5 53
Pavir.J36491.1.p Myb 59 104

Links

Other Myb/SANT family TFs
Other Panicum virgatum TFs

15 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Pavir.Ib03599 Panicum virgatum Pavir.Ib03599 N 0.836
Traes_1AL_28010F812 Triticum aestivum Traes_1AL_28010F812 N 0.832
OPUNC10G13240 Oryza punctata OPUNC10G13240 N 0.784
Pavir.Ia01569 Panicum virgatum Pavir.Ia01569 N 0.784
OB10G21860 Oryza brachyantha OB10G21860 N 0.783
BGIOSGA031610 Oryza indica BGIOSGA031610 N 0.779
OBART10G14710 Oryza barthii OBART10G14710 N 0.779
OGLUM10G14600 Oryza glumaepatula OGLUM10G14600 N 0.779
OMERI10G11440 Oryza meridionalis OMERI10G11440 N 0.779
ONIVA10G16530 Oryza nivara ONIVA10G16530 N 0.779
ORUFI10G15680 Oryza rufipogon ORUFI10G15680 N 0.779
Traes_1BL_C664E8E1E Triticum aestivum Traes_1BL_C664E8E1E N 0.733
MLOC_72262 Hordeum vulgare MLOC_72262 N 0.705
Traes_1DL_2714E3604 Triticum aestivum Traes_1DL_2714E3604 N 0.691
Sb01g018060 Sorghum bicolor Sb01g018060 N 0.661