CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pavir.Fa00462
(
Panicum virgatum
)
mTERF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02536 (mTERF)
IPR003690
Pavir.Fa00462
T265057_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pavir.Fa00462.1.p
mTERF
12
323
AQWLRENGFDEETVARMSRRCKNLHSLDAGEASGVWDYLLTGVKIERRRLRHVVAKCPKVLTLPVDGKLVPTVQCLATLQAKPGEVAQAIAKFPQILFHSVEEKLCPLLAFFQTLGVSEKQLAKLLMVNPRLISYSIEAKFSQTVDFLVGLGIDKEGMIGKILTKEPYIMGYSVDKRLRPTAEFLKSEIGLQGSDLKRVIMSFPDILSRDVDKILRPNLAFLQSCSFSKGQVMALVAGYPPVLIKSVKHCLEPRIKFLVEEMGRDMGEVVHYPQFFRHGLKRSLEYRHKVLKQNNSSCSLSEMLDCNQKKFA
Pavir.Fa00462.2.p
mTERF
12
323
AQWLRENGFDEETVARMSRRCKNLHSLDAGEASGVWDYLLTGVKIERRRLRHVVAKCPKVLTLPVDGKLVPTVQCLATLQAKPGEVAQAIAKFPQILFHSVEEKLCPLLAFFQTLGVSEKQLAKLLMVNPRLISYSIEAKFSQTVDFLVGLGIDKEGMIGKILTKEPYIMGYSVDKRLRPTAEFLKSEIGLQGSDLKRVIMSFPDILSRDVDKILRPNLAFLQSCSFSKGQVMALVAGYPPVLIKSVKHCLEPRIKFLVEEMGRDMGEVVHYPQFFRHGLKRSLEYRHKVLKQNNSSCSLSEMLDCNQKKFA
Links
Other
mTERF
family TFs
Other
Panicum virgatum
TFs
23 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AC204621.4_FG006
Zea mays
AC204621.4_FG006
N
BGIOSGA010551
Oryza indica
BGIOSGA010551
N
GRMZM2G110067
Zea mays
GRMZM2G110067
N
GRMZM2G359304
Zea mays
GRMZM2G359304
N
ONIVA03G23070
Oryza nivara
ONIVA03G23070
N
OPUNC03G19880
Oryza punctata
OPUNC03G19880
N
ORUFI03G21700
Oryza rufipogon
ORUFI03G21700
N
Sb01g032800
Sorghum bicolor
Sb01g032800
N
Si040237m.g
Setaria italica
Si040237m.g
N