CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Si040237m.g
(
Setaria italica
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
Si040237m.g
T201540_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Si040237m
GRAS
151
523
AEQLLNPCAAAVEAGNLSRAQHLFYVLGELASFSGDANHRLAAHGLHALSRRLPAAVGPAAAASVRVPPCERPAPAFAGAEPRLFRASLIRFHEVSPWFALPNALANAAIARAAAAGAPRPLHVVDLGVSHGVQWPTLLESLTRMPGGRAPPSVRLTVVAAGTPPAPFSASPPGYDFSPHLLRYAKSINLPLAISRAACLDSVHSLAAPGEALVVCLQFRLGHTTADERARILNKVRGLNPELVVLSEVDGGGVDGTAAGGFAARLELLWRFLESTSAAFKGRDGEERRLLEAEAGTSVAAAEVAGEGRDAWRERMAAAGFEEAAFGDEAVESARSLLRKYDGGWEMSAPAGSAGAVALRWKAQPVSFCSLWR
Links
Other
GRAS
family TFs
Other
Setaria italica
TFs
11 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GRMZM2G110067
Zea mays
GRMZM2G110067
N
0.831
AC204621.4_FG006
Zea mays
AC204621.4_FG006
N
0.828
ONIVA03G23070
Oryza nivara
ONIVA03G23070
N
0.783
OMERI03G19190
Oryza meridionalis
OMERI03G19190
N
0.782
BGIOSGA010551
Oryza indica
BGIOSGA010551
N
0.781
ORUFI03G21700
Oryza rufipogon
ORUFI03G21700
N
0.781
GRMZM2G359304
Zea mays
GRMZM2G359304
N
0.777
OPUNC03G19880
Oryza punctata
OPUNC03G19880
N
0.742
MLOC_33371
Hordeum vulgare
MLOC_33371
N
0.731
Traes_2BL_88A78A71E
Triticum aestivum
Traes_2BL_88A78A71E
N
0.728
Sb01g032800
Sorghum bicolor
Sb01g032800
N
0.721