Bo2g115180 (Brassica oleracea)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 Bo2g115180 T267169_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
KAN4
M00881_2.00 		Arabidopsis thaliana
NWNRTBCNN
NNGVAYNWN		 PBM
Franco-Zorrilla et al.(2014)
KAN4 		0.909 1.000
KAN1
M00878_2.00 		Arabidopsis thaliana
NNRTNBNN
NNVNAYNN		 PBM
Franco-Zorrilla et al.(2014)
KAN1 		0.821 0.915
KAN1
M02308_2.00 		Arabidopsis thaliana
NDNDTAHNHN
NDNDTAHNHN		 PBM
Weirauch et al.(2014)
pTH7135 		0.821 0.915
KAN2
M07018_2.00 		Arabidopsis thaliana
HHHNDWATATTCTYH
DRAGAATATWHNDDD		 Dap-seq
OMalley et al.(2016)
KAN2_col_a 		0.786 0.915
KAN2
M07019_2.00 		Arabidopsis thaliana
NWWTATTCYYH
DRRGAATAWWN		 Dap-seq
OMalley et al.(2016)
KAN2_colamp_a 		0.786 0.915
PK26523.1
M01283_2.00 		Cannabis sativa
NWHATTCYNN
NNRGAATDWN		 PBM
Lambert et al.(2019)
pTH11304 		0.664 0.702
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo2g115180.1 Myb 114 165

Links

Other Myb/SANT family TFs
Other Brassica oleracea TFs

399 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29648.m002012 Ricinus communis 29648.m002012 I
Carubv10020834m.g Capsella rubella Carubv10020834m.g I
Cagra.0096s0087 Capsella grandiflora Cagra.0096s0087 I
Bostr.20129s0180 Boechera stricta Bostr.20129s0180 I
Bostr.13129s0073 Boechera stricta Bostr.13129s0073 I
Aquca_027_00052 Aquilegia coerulea Aquca_027_00052 I
mgf016382m Mimulus guttatus mgf016382m I
mgf007362m Mimulus guttatus mgf007362m I
cassava3577.m1 Manihot esculenta cassava3577.m1 I
cassava26728.m1 Manihot esculenta cassava26728.m1 I
Eucgr.B02485 Eucalyptus grandis Eucgr.B02485 I
Pm011604 Prunus mume Pm011604 I
Pm004758 Prunus mume Pm004758 I
Ca_12031 Cicer arietinum Ca_12031 I
Ca_02520 Cicer arietinum Ca_02520 I
VIT_08s0040g02110 Vitis vinifera VIT_08s0040g02110 I
VIT_06s0004g03080 Vitis vinifera VIT_06s0004g03080 I
TCM_041055 Theobroma cacao TCM_041055 I
Solyc10g006880.2 Solanum lycopersicum Solyc10g006880.2 I
Solyc06g060230.2 Solanum lycopersicum Solyc06g060230.2 I
Gorai.009G418700 Gossypium raimondii Gorai.009G418700 I
LjSGA_036741.1 Lotus japonicus LjSGA_036741.1 I
chr3.CM0111.130.nd Lotus japonicus chr3.CM0111.130.nd I
chr1.CM0033.600.nc Lotus japonicus chr1.CM0033.600.nc I
PK08629.1 Cannabis sativa PK08629.1 I
Thhalv10018998m.g Eutrema salsugineum Thhalv10018998m.g I
Thhalv10014325m.g Eutrema salsugineum Thhalv10014325m.g I
Thhalv10008371m.g Eutrema salsugineum Thhalv10008371m.g I
Lus10036117.g Linum usitatissimum Lus10036117.g I
Lus10007410.g Linum usitatissimum Lus10007410.g I
VIT_07s0031g02610 Vitis vinifera VIT_07s0031g02610 I
gene11226-v1.0-hybrid Fragaria vesca gene11226-v1.0-hybrid I
gene04766-v1.0-hybrid Fragaria vesca gene04766-v1.0-hybrid I
evm.TU.contig_33298 Carica papaya evm.TU.contig_33298 I
Eucgr.I00095 Eucalyptus grandis Eucgr.I00095 I
Eucgr.I00058 Eucalyptus grandis Eucgr.I00058 I
Eucgr.I00057 Eucalyptus grandis Eucgr.I00057 I
Eucgr.I00056 Eucalyptus grandis Eucgr.I00056 I
Eucgr.F04341 Eucalyptus grandis Eucgr.F04341 I
Bra009370 Brassica rapa Bra009370 I
GLYMA19G36421 Glycine max GLYMA19G36421 I
SELMODRAFT_147012 Selaginella moellendorffii SELMODRAFT_147012 I
GLYMA12G29360 Glycine max GLYMA12G29360 I
GLYMA12G21272 Glycine max GLYMA12G21272 I
GLYMA05G15533 Glycine max GLYMA05G15533 I
GLYMA03G33690 Glycine max GLYMA03G33690 I
GLYMA02G26480 Glycine max GLYMA02G26480 I
Bra028645 Brassica rapa Bra028645 I
Bra018997 Brassica rapa Bra018997 I
GLYMA13G40251 Glycine max GLYMA13G40251 I
Bra008309 Brassica rapa Bra008309 I
Bra006015 Brassica rapa Bra006015 I
Bo9g174170 Brassica oleracea Bo9g174170 I
Bo6g030920 Brassica oleracea Bo6g030920 I
Bo3g005100 Brassica oleracea Bo3g005100 I
Bo2g009250 Brassica oleracea Bo2g009250 I
Bo02109s010 Brassica oleracea Bo02109s010 I
NAC081 Arabidopsis thaliana AT5G08790 I
NAC032 Arabidopsis thaliana AT1G77450 I
PRUPE_ppa007577mg Prunus persica PRUPE_ppa007577mg I
SELMODRAFT_108667 Selaginella moellendorffii SELMODRAFT_108667 I
ATAF2 Arabidopsis lyrata scaffold_600916.1 I
anac032 Arabidopsis lyrata scaffold_202708.1 I
Sb03g037940 Sorghum bicolor Sb03g037940 I
PRUPE_ppa009380mg Prunus persica PRUPE_ppa009380mg I
GRMZM2G068973 Zea mays GRMZM2G068973 I
POPTR_0011s04650 Populus trichocarpa POPTR_0011s04650 I
POPTR_0005s20240 Populus trichocarpa POPTR_0005s20240 I
GSMUA_Achr10G29200_001 Musa acuminata GSMUA_Achr10G29200_001 I
OPUNC01G34000 Oryza punctata OPUNC01G34000 I
MTR_7g100990 Medicago truncatula MTR_7g100990 I
GSMUA_Achr6G32330_001 Musa acuminata GSMUA_Achr6G32330_001 I
GSMUA_AchrUn_randomG17360_001 Musa acuminata GSMUA_AchrUn_randomG17360_001 I
PGSC0003DMG400009245 Solanum tuberosum PGSC0003DMG400009245 I
MTR_2g093810 Medicago truncatula MTR_2g093810 I
orange1.1g042614m.g Citrus sinensis orange1.1g042614m.g N
Ciclev10030252m.g Citrus clementina Ciclev10030252m.g N
AMTR_s00007p00063550 Amborella trichopoda AMTR_s00007p00063550 N
PRUPE_ppa017586mg Prunus persica PRUPE_ppa017586mg N
orange1.1g045934m.g Citrus sinensis orange1.1g045934m.g N
MDP0000255884 Malus domestica MDP0000255884 N
Pm001001 Prunus mume Pm001001 N
Lus10023179.g Linum usitatissimum Lus10023179.g N
Lus10015076.g Linum usitatissimum Lus10015076.g N
GLYMA10G09246 Glycine max GLYMA10G09246 N
30111.m000742 Ricinus communis 30111.m000742 N