evm.TU.contig_33298 (Carica papaya)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02365 (NAM) IPR003441 evm.TU.contig_33298 T297825_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NAC018
M07176_2.00 		Arabidopsis thaliana
DYACGBMAYYD
HRRTKVCGTRH		 Dap-seq
OMalley et al.(2016)
NAM_colamp_a 		0.882 0.732
NAC018
M07177_2.00 		Arabidopsis thaliana
WDNCKWNHNNNWYACGBMA
TKVCGTRWNNNDNWMGNHW		 Dap-seq
OMalley et al.(2016)
NAM_col_v3a 		0.882 0.732
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
evm.TU.contig_33298.1 NAC/NAM 11 137

Links

Other NAC/NAM family TFs
Other Carica papaya TFs

47 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Eucgr.B02485 Eucalyptus grandis Eucgr.B02485 I 0.921
Thhalv10012308m.g Eutrema salsugineum Thhalv10012308m.g I 0.915
Bo6g030920 Brassica oleracea Bo6g030920 I 0.914
Bra018997 Brassica rapa Bra018997 I 0.914
AMTR_s00007p00063550 Amborella trichopoda AMTR_s00007p00063550 N 0.914
30111.m000742 Ricinus communis 30111.m000742 N 0.908
TCM_041055 Theobroma cacao TCM_041055 I 0.905
GLYMA13G40251 Glycine max GLYMA13G40251 I 0.904
Lus10036117.g Linum usitatissimum Lus10036117.g I 0.904
30078.m002348 Ricinus communis 30078.m002348 I 0.903
GLYMA19G36421 Glycine max GLYMA19G36421 I 0.901
cassava3577.m1 Manihot esculenta cassava3577.m1 I 0.900
VIT_08s0040g02110 Vitis vinifera VIT_08s0040g02110 I 0.900
Lus10007410.g Linum usitatissimum Lus10007410.g I 0.900
Gorai.009G418700 Gossypium raimondii Gorai.009G418700 I 0.900
evm.TU.supercontig_435.1 Carica papaya evm.TU.supercontig_435.1 N 0.898
GLYMA03G33690 Glycine max GLYMA03G33690 I 0.897
chr3.CM0111.130.nd Lotus japonicus chr3.CM0111.130.nd I 0.896
MTR_7g100990 Medicago truncatula MTR_7g100990 I 0.895
GLYMA12G21272 Glycine max GLYMA12G21272 I 0.895
VIT_06s0004g03080 Vitis vinifera VIT_06s0004g03080 I 0.894
GLYMA05G15533 Glycine max GLYMA05G15533 I 0.894
GLYMA12G29360 Glycine max GLYMA12G29360 I 0.892
chr1.CM0033.600.nc Lotus japonicus chr1.CM0033.600.nc I 0.890
Ca_12031 Cicer arietinum Ca_12031 I 0.888
POPTR_0011s05760 Populus trichocarpa POPTR_0011s05760 N 0.888
Gorai.011G030600 Gossypium raimondii Gorai.011G030600 N 0.887
TCM_029796 Theobroma cacao TCM_029796 I 0.886
Lus10023179.g Linum usitatissimum Lus10023179.g N 0.885
Si030267m.g Setaria italica Si030267m.g I 0.884
Carubv10009524m.g Capsella rubella Carubv10009524m.g I 0.883
Cagra.0946s0024 Capsella grandiflora Cagra.0946s0024 I 0.883
Bostr.0124s0081 Boechera stricta Bostr.0124s0081 I 0.882
NAC018 Arabidopsis thaliana AT1G52880 D 0.882
Gorai.006G088400 Gossypium raimondii Gorai.006G088400 I 0.881
Eucgr.J00940 Eucalyptus grandis Eucgr.J00940 N 0.880
anac025 Vitis vinifera VIT_00s0375g00040 I 0.878
MDP0000674514 Malus domestica MDP0000674514 I 0.877
Lus10015076.g Linum usitatissimum Lus10015076.g N 0.877
NAM Arabidopsis lyrata fgenesh2_kg.1__4366__AT1G52880.1 I 0.877
GRMZM2G430849 Zea mays GRMZM2G430849 I 0.877
OB03G25680 Oryza brachyantha OB03G25680 I 0.876
LPERR03G13950 Leersia perrieri LPERR03G13950 I 0.874
POPTR_0004s04920 Populus trichocarpa POPTR_0004s04920 I 0.874
MTR_2g093810 Medicago truncatula MTR_2g093810 I 0.873
Bo1g128420 Brassica oleracea Bo1g128420 I 0.872
Bra021114 Brassica rapa Bra021114 I 0.872