Bra023486 (Brassica rapa)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 Bra023486 T267955_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
WER
M11047_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$WEREWOLF_Q2_01 		0.811 0.988
WER
M11048_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$WEREWOLF_Q2 		0.811 0.988
MYB23
M07133_2.00 		Arabidopsis thaliana
HCAACWAHHHH
DDDDTWGTTGD		 Dap-seq
OMalley et al.(2016)
MYB23_col_a 		0.720 0.940
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bra023486.1-P Myb 18 55
Bra023486.1-P Myb 61 106

Links

Other Myb/SANT family TFs
Other Brassica rapa TFs

50 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Moror_17584 Moniliophthora roreri Moror_17584 I
ASIM_0001223701 Anisakis simplex ASIM_0001223701 I
SPPG_07283 Spizellomyces punctatus SPPG_07283 I
M407DRAFT_3685 Tulasnella calospora M407DRAFT_3685 I
ENSLACG00000015426 Latimeria chalumnae ENSLACG00000015426 I
BOTBODRAFT_55238 Botryobasidium botryosum BOTBODRAFT_55238 I
FIBRA_09002 Fibroporia radiculosa FIBRA_09002 N
GUITHDRAFT_151863 Guillardia theta GUITHDRAFT_151863 N
GUITHDRAFT_57770 Guillardia theta GUITHDRAFT_57770 N
JAAARDRAFT_238259 Jaapia argillacea JAAARDRAFT_238259 N
CERSUDRAFT_111157 Ceriporiopsis subvermispora CERSUDRAFT_111157 N
PHSY_000528 Pseudozyma hubeiensis PHSY_000528 N
PIIN_01101 Piriformospora indica PIIN_01101 N
PILCRDRAFT_1250 Piloderma croceum PILCRDRAFT_1250 N
PLEOSDRAFT_1089027 Pleurotus ostreatus PLEOSDRAFT_1089027 N
sr13089 Sporisorium reilianum sr13089 N
UHOR_03142 Ustilago hordei UHOR_03142 N
UM05182 Ustilago maydis UM05182 N
VICG_00572 Vittaforma corneae VICG_00572 N