fgenesh2_kg.2__1540__AT1G72740.1 (Arabidopsis lyrata)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 fgenesh2_kg.2__1540__AT1G72740.1 T270750_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT1G72740
M07033_2.00 		Arabidopsis thaliana
HMNAAACCCTAAWYY
RRWTTAGGGTTTNKD		 Dap-seq
OMalley et al.(2016)
AT1G72740_col_a 		0.875 0.957
AT1G72740
M07034_2.00 		Arabidopsis thaliana
HNWAACCCTAAHYHNNNHNNN
NNNDNNNDRDTTAGGGTTWND		 Dap-seq
OMalley et al.(2016)
AT1G72740_colamp_a 		0.875 0.957
OS01G0708000
M02326_2.00 		Oryza sativa
WRMCCTAVNN
NNBTAGGKYW		 PBM
Weirauch et al.(2014)
pTH8716 		0.804 0.766
TRB1
M01070_2.00 		Arabidopsis thaliana
WRMCCTAR
YTAGGKYW		 PBM
Sullivan et al.(2014)
pTH7117 		0.728 0.702
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
fgenesh2_kg.2__1540__AT1G72740.1 Myb 5 57

Links

Other Myb/SANT family TFs
Other Arabidopsis lyrata TFs

139 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Mlxip Mus musculus ENSMUSG00000038342 D
MLXIP Pan troglodytes ENSPTRG00000005573 I
ENSNLEG00000001393 Nomascus leucogenys ENSNLEG00000001393 I
ENSOARG00000012001 Ovis aries ENSOARG00000012001 I
MLXIP Oryctolagus cuniculus ENSOCUG00000011261 I
MLXIP Otolemur garnettii ENSOGAG00000005992 I
MLXIP Ochotona princeps ENSOPRG00000016617 I
ENSPANG00000019208 Papio anubis ENSPANG00000019208 I
MLXIP Procavia capensis ENSPCAG00000007368 I
ENSPPYG00000005061 Pongo abelii ENSPPYG00000005061 I
MLXIP Monodelphis domestica ENSMODG00000012174 I
Mlxip Rattus norvegicus ENSRNOG00000001255 I
ENSSHAG00000007918 Sarcophilus harrisii ENSSHAG00000007918 I
MLXIP Sus scrofa ENSSSCG00000009794 I
ENSSTOG00000001742 Ictidomys tridecemlineatus ENSSTOG00000001742 I
MLXIP Tursiops truncatus ENSTTRG00000003024 I
ENSP00000312834-D1 Bos grunniens ENSP00000312834-D1 I
ENSP00000312834 Macaca fascicularis ENSP00000312834 I
Myotis_brandtii_Mlxip_10021734 Myotis brandtii Myotis_brandtii_Mlxip_10021734 I
MLXIP Erinaceus europaeus ENSEEUG00000010841 I
MLXIP Bos taurus ENSBTAG00000004189 I
MLXIP Canis familiaris ENSCAFG00000007965 I
ENSCJAG00000020340 Callithrix jacchus ENSCJAG00000020340 I
MLXIP Cavia porcellus ENSCPOG00000003122 I
ENSCSAG00000002159 Chlorocebus sabaeus ENSCSAG00000002159 I
MLXIP Dasypus novemcinctus ENSDNOG00000012530 I
Mlxip Dipodomys ordii ENSDORG00000005954 I
MLXIP Equus caballus ENSECAG00000012056 I
ENSAMEG00000014572 Ailuropoda melanoleuca ENSAMEG00000014572 I
MLXIP Felis catus ENSFCAG00000012108 I
MLXIP Homo sapiens ENSG00000175727 I
MLXIP Gorilla gorilla ENSGGOG00000022345 I
MLXIP Loxodonta africana ENSLAFG00000016436 I
ENSMEUG00000000276 Macropus eugenii ENSMEUG00000000276 I
MLXIP Microcebus murinus ENSMICG00000001163 I
MLXIP Myotis lucifugus ENSMLUG00000017230 I
MLXIP Macaca mulatta ENSMMUG00000012652 I