fgenesh_scip_prom.46568.8840 (Phytophthora kernoviae)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 fgenesh_scip_prom.46568.8840 T270947_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Phyra80938
M02333_2.00 		Phytophthora ramorum
NNGWABCYWN
NWRGVTWCNN		 PBM
Weirauch et al.(2014)
pTH7925 		0.682 0.652
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
fgenesh_scip_prom.46568.8840 Myb 46 91

Links

Other Myb/SANT family TFs
Other Phytophthora kernoviae TFs

39 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Phyra80938 Phytophthora ramorum Phyra80938 D 0.682
F443_20703 Phytophthora parasitica F443_20703 I 0.682
estExt_fgenesh1_kg.C_2050026 Phytophthora capsici estExt_fgenesh1_kg.C_2050026 I 0.682
PK06453.1 Cannabis sativa PK06453.1 I 0.881
fgenesh_scip_prom.28083.5526 Phytophthora lateralis fgenesh_scip_prom.28083.5526 I 0.682
maker-pve_contig_13-snap-gene-0.46 Pythium vexans maker-pve_contig_13-snap-gene-0.46 I 0.697
maker-pve_contig_1017-fgenesh-gene-0.2 Pythium vexans maker-pve_contig_1017-fgenesh-gene-0.2 I 0.680
maker-pag1_scaffold_151-fgenesh-gene-0.1 Pythium aphanidermatum maker-pag1_scaffold_151-fgenesh-gene-0.1 I 0.891
maker-par_contig_2748-snap-gene-0.2 Pythium arrhenomanes maker-par_contig_2748-snap-gene-0.2 I 0.683
Physo132941 Phytophthora sojae Physo132941 I 0.682
Phyra73305 Phytophthora ramorum Phyra73305 N 0.750
fgenesh1_pg.C_scaffold_11000265 Phytophthora capsici fgenesh1_pg.C_scaffold_11000265 N 0.676
Phyra73321 Phytophthora ramorum Phyra73321 N 0.668
Physo131312 Phytophthora sojae Physo131312 N 0.750
Physo131337 Phytophthora sojae Physo131337 N 0.676
PITG_11731 Phytophthora infestans PITG_11731 N 0.738
PITG_19362 Phytophthora infestans PITG_19362 N 0.738
PYU1_G003089 Pythium ultimum PYU1_G003089 N 0.676
PYU1_G003099 Pythium ultimum PYU1_G003099 N 0.677
PYU1_G003104 Pythium ultimum PYU1_G003104 N 0.757
PYU1_G003105 Pythium ultimum PYU1_G003105 N 0.679
estExt_fgenesh1_kg.C_260006 Phytophthora capsici estExt_fgenesh1_kg.C_260006 N 0.750
F443_03220 Phytophthora parasitica F443_03220 N 0.750
maker-pve_contig_603-fgenesh-gene-0.5 Pythium vexans maker-pve_contig_603-fgenesh-gene-0.5 N 0.757
maker-pve_contig_364-fgenesh-gene-0.6 Pythium vexans maker-pve_contig_364-fgenesh-gene-0.6 N 0.664
maker-piw_contig_4506-fgenesh-gene-0.0 Pythium iwayamai maker-piw_contig_4506-fgenesh-gene-0.0 N 0.666
maker-piw_contig_3307-fgenesh-gene-0.0 Pythium iwayamai maker-piw_contig_3307-fgenesh-gene-0.0 N 0.757
maker-piw_contig_1647-fgenesh-gene-0.1 Pythium iwayamai maker-piw_contig_1647-fgenesh-gene-0.1 N 0.676
maker-pir_contig_945-fgenesh-gene-0.0 Pythium irregulare maker-pir_contig_945-fgenesh-gene-0.0 N 0.664
maker-pir_contig_524-snap-gene-0.12 Pythium irregulare maker-pir_contig_524-snap-gene-0.12 N 0.694
maker-pir_contig_142-fgenesh-gene-0.5 Pythium irregulare maker-pir_contig_142-fgenesh-gene-0.5 N 0.757
maker-par_contig_8833-fgenesh-gene-0.0 Pythium arrhenomanes maker-par_contig_8833-fgenesh-gene-0.0 N 0.828
maker-pag1_scaffold_154-snap-gene-0.26 Pythium aphanidermatum maker-pag1_scaffold_154-snap-gene-0.26 N 0.695
HpaG811475 Hyaloperonospora arabidopsidis HpaG811475 N 0.750
fgenesh_scip_prom.46568.7327 Phytophthora kernoviae fgenesh_scip_prom.46568.7327 N 0.676
fgenesh_scip_prom.28083.3853 Phytophthora lateralis fgenesh_scip_prom.28083.3853 N 0.668
fgenesh_scip_prom.28083.12018 Phytophthora lateralis fgenesh_scip_prom.28083.12018 N 0.750
fgenesh_masked-pir_contig_142-abinit-gene-0.47 Pythium irregulare fgenesh_masked-pir_contig_142-abinit-gene-0.47 N 0.679
F443_16339 Phytophthora parasitica F443_16339 N 0.694