CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

GLYMA11G33180 *(Glycine max)* Myb/SANT
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source	Animal TF db
PF00249 (Myb_DNA-binding)	IPR014778	GLYMA11G33180	T271542_2.00	Ensembl (2018-Dec-8)	Link out
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
RVE1 M00879_2.00	Arabidopsis thaliana	AAATATCT	AGATATTT	PBM Franco-Zorrilla et al.(2014) RVE1	0.892	0.957
RVE1 M07128_2.00	Arabidopsis thaliana	NNNWAAATATCTNN	NNAGATATTTWNNN	Dap-seq OMalley et al.(2016) RVE1_col_a	0.892	0.957
RVE1 M07129_2.00	Arabidopsis thaliana	NNWAATATCW	WGATATTWNN	Dap-seq OMalley et al.(2016) RVE1_colamp_a	0.892	0.957
PK08316.1 M02350_2.00	Cannabis sativa	NNNRWATCNN	NNGATWYNNN	PBM Weirauch et al.(2014) pTH9488	0.803	0.870
OS08G0157600 M02330_2.00	Oryza sativa	DNRTATCHN	NDGATAYNH	PBM Weirauch et al.(2014) pTH7793	0.794	0.891
LHY M06997_2.00	Arabidopsis thaliana	NWAAATATCT	AGATATTTWN	Dap-seq OMalley et al.(2016) LHY1_col_a	0.785	0.848
LHY M06998_2.00	Arabidopsis thaliana	NNWAAATATCT	AGATATTTWNN	Dap-seq OMalley et al.(2016) LHY1_colamp_a	0.785	0.848
CCA1 M00875_2.00	Arabidopsis thaliana	NDNRWATCN	NGATWYNHN	PBM Franco-Zorrilla et al.(2014) CCA1	0.749	0.826
CCA1 M11039_2.00	Arabidopsis thaliana	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$CCA1_Q5	0.749	0.826
RVE5 M01079_2.00	Arabidopsis thaliana	NWAATATCHN	NDGATATTWN	PBM Sullivan et al.(2014) pTH7138	0.740	0.696
RVE5 M07100_2.00	Arabidopsis thaliana	NNAAAATATCT	AGATATTTTNN	Dap-seq OMalley et al.(2016) At4g01280_col_a	0.740	0.696
RVE5 M07101_2.00	Arabidopsis thaliana	NNWAAATATCT	AGATATTTWNN	Dap-seq OMalley et al.(2016) At4g01280_colamp_a	0.740	0.696
RVE7 M01069_2.00	Arabidopsis thaliana	NDHRWATCNN	NNGATWYDHN	PBM Sullivan et al.(2014) pTH7081	0.720	0.783
RVE7 M02286_2.00	Arabidopsis thaliana	NDARTATCH	DGATAYTHN	PBM Weirauch et al.(2014) pTH7277	0.720	0.783
RVE7L M07071_2.00	Arabidopsis thaliana	NNNNWAAATATCWNN	NNWGATATTTWNNNN	Dap-seq OMalley et al.(2016) AT3G10113_col_a	0.720	0.783
RVE7 M07008_2.00	Arabidopsis thaliana	NNWAAATATCT	AGATATTTWNN	Dap-seq OMalley et al.(2016) EPR1_colamp_a	0.720	0.783
RVE7 M07009_2.00	Arabidopsis thaliana	NWAAATATCTHN	NDAGATATTTWN	Dap-seq OMalley et al.(2016) EPR1_col	0.720	0.783
mybG M02319_2.00	Dictyostelium discoideum	WAATATCT	AGATATTW	PBM Weirauch et al.(2014) pTH5362	0.699	0.696
RVE8 M01074_2.00	Arabidopsis thaliana	NNNRWATCNN	NNGATWYNNN	PBM Sullivan et al.(2014) pTH7136	0.665	0.674
RVE8 M07069_2.00	Arabidopsis thaliana	NHNWAAATATCT	AGATATTTWNDN	Dap-seq OMalley et al.(2016) At3g09600_col_a	0.665	0.674
RVE8 M07070_2.00	Arabidopsis thaliana	NNWAAATATCT	AGATATTTWNN	Dap-seq OMalley et al.(2016) At3g09600_colamp_a	0.665	0.674
PK02532.1 M02347_2.00	Cannabis sativa	WAATATCTN	NAGATATTW	PBM Weirauch et al.(2014) pTH9579	0.665	0.652
RVE4 M07117_2.00	Arabidopsis thaliana	NNWAAATATCT	AGATATTTWNN	Dap-seq OMalley et al.(2016) LCL1_colamp_a	0.665	0.652
RVE4 M07118_2.00	Arabidopsis thaliana	NAAAATATCT	AGATATTTTN	Dap-seq OMalley et al.(2016) LCL1_col	0.665	0.652
For this family, TFs with SR scores > 0.661* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
GLYMA11G33180.1	Myb	59	104	RERWTDEEHKKFLEALKLYGRAWRRIEEHVGTKTAVQIRSHAQKFF

Links
Other Myb/SANT family TFs
Other *Glycine max* TFs

459 Related TFs

Name	Species	Gene ID	Motif Evidence	SR Score	Action
PGSC0003DMG400020711	Solanum tuberosum	PGSC0003DMG400020711	I	0.000
SapurV1A.0422s0040	Salix purpurea	SapurV1A.0422s0040	I	0.000
POPTR_0003s00890	Populus trichocarpa	POPTR_0003s00890	N	0.000
PRUPE_ppa002394mg	Prunus persica	PRUPE_ppa002394mg	N	0.000
Solyc01g103050.2	Solanum lycopersicum	Solyc01g103050.2	N	0.000
29609.m000587	Ricinus communis	29609.m000587	N	0.000
cassava11453.m1	Manihot esculenta	cassava11453.m1	N	0.000
cassava11454.m1	Manihot esculenta	cassava11454.m1	N	0.000
cassava11455.m1	Manihot esculenta	cassava11455.m1	N	0.000
cassava11456.m1	Manihot esculenta	cassava11456.m1	N	0.000
cassava7098.valid.m1	Manihot esculenta	cassava7098.valid.m1	N	0.000
cassava7099.valid.m1	Manihot esculenta	cassava7099.valid.m1	N	0.000
Ciclev10000491m.g	Citrus clementina	Ciclev10000491m.g	N	0.000
gene29255-v1.0-hybrid	Fragaria vesca	gene29255-v1.0-hybrid	N	0.000
Lus10007440.g	Linum usitatissimum	Lus10007440.g	N	0.000
Lus10024455.g	Linum usitatissimum	Lus10024455.g	N	0.000
SapurV1A.0225s0120	Salix purpurea	SapurV1A.0225s0120	N	0.000
ARF1	Arabidopsis thaliana	AT1G59750	N	0.000

GLYMA11G33180 (Glycine max) Myb/SANT

TF Information

Directly determined binding motifs

Motifs from related TFs

DNA Binding Domains

Links

459 Related TFs

GLYMA11G33180 **(Glycine max)
Myb/SANT**