CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MTR_5g088010
(
Medicago truncatula
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00249 (Myb_DNA-binding)
IPR014778
MTR_5g088010
T274884_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AET00070
Myb
61
106
HWTDDEHKLFLKGLKKHGKGRWKDISKEFVVTKTPTQIASHAQKYF
Links
Other
Myb/SANT
family TFs
Other
Medicago truncatula
TFs
12 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
MTR_5g088060
Medicago truncatula
MTR_5g088060
I
0.758
MTR_5g488160
Medicago truncatula
MTR_5g488160
I
0.758
PGSC0003DMG400024572
Solanum tuberosum
PGSC0003DMG400024572
I
0.663
Sb03g006450
Sorghum bicolor
Sb03g006450
I
0.663
Ca_17598
Cicer arietinum
Ca_17598
I
0.662
evm.TU.supercontig_35.12
Carica papaya
evm.TU.supercontig_35.12
I
0.663
Gorai.003G071500
Gossypium raimondii
Gorai.003G071500
I
0.663
Lus10004248.g
Linum usitatissimum
Lus10004248.g
I
0.663
chr6.CM0114.280.nc
Lotus japonicus
chr6.CM0114.280.nc
I
0.749
MTR_5g027550
Medicago truncatula
MTR_5g027550
N
0.734
MTR_5g027570
Medicago truncatula
MTR_5g027570
N
0.791
LjSGA_029436.1
Lotus japonicus
LjSGA_029436.1
N
0.681