OLONG_011886 (Oryza longistaminata)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 OLONG_011886 T275933_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Q948S5_TOBAC
M11074_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MYBA2_01 		0.757 0.842
PC-MYB1
M07110_2.00 		Arabidopsis thaliana
NDWWNTDRCCGTTRN
NYAACGGYHANWWHN		 Dap-seq
OMalley et al.(2016)
MYB3R1_col_a 		0.756 0.806
PC-MYB1
M07111_2.00 		Arabidopsis thaliana
DWHNTDRCCGTTR
YAACGGYHANDWH		 Dap-seq
OMalley et al.(2016)
MYB3R1_colamp_a 		0.756 0.806
PK12011.1
M01279_2.00 		Cannabis sativa
HAACGGHHNN
NNDDCCGTTD		 PBM
Lambert et al.(2019)
pTH11423 		0.726 0.835
MYB3R4
M07125_2.00 		Arabidopsis thaliana
NDWWNTDRCCGTTRN
NYAACGGYHANWWHN		 Dap-seq
OMalley et al.(2016)
MYB3R4_col_a 		0.710 0.784
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OLONG_011886-R1 Myb 50 96
OLONG_011886-R1 Myb 102 148
OLONG_011886-R1 Myb 154 198

Links

Other Myb/SANT family TFs
Other Oryza longistaminata TFs

140 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
G210_4239 Candida maltosa G210_4239 I 0.000
PLEOSDRAFT_18759 Pleurotus ostreatus PLEOSDRAFT_18759 N 0.000
gwh2.9.410.1 Phanerochaete chrysosporium gwh2.9.410.1 N 0.000
gw1.6.1266.1 Mucor circinelloides gw1.6.1266.1 N 0.000
gw1.4.1763.1 Mucor circinelloides gw1.4.1763.1 N 0.000
gw1.1.808.1 Phycomyces blakesleeanus gw1.1.808.1 N 0.000
gw1.1.777.1 Phycomyces blakesleeanus gw1.1.777.1 N 0.000
estExt_fgeneshMC_kg.C_30303 Mucor circinelloides estExt_fgeneshMC_kg.C_30303 N 0.000
Z518_08946 Rhinocladiella mackenziei Z518_08946 N 0.000
VDBG_08894 Verticillium alfalfae VDBG_08894 N 0.000
UV8b_7728 Ustilaginoidea virens UV8b_7728 N 0.000
SERLA73DRAFT_17521 Serpula lacrymans SERLA73DRAFT_17521 N 0.000
H101_07561 Trichophyton interdigitale H101_07561 N 0.000
PILCRDRAFT_36344 Piloderma croceum PILCRDRAFT_36344 N 0.000
PHLGIDRAFT_73850 Phlebiopsis gigantea PHLGIDRAFT_73850 N 0.000
PDIP_53990 Penicillium digitatum PDIP_53990 N 0.000
Moror_5215 Moniliophthora roreri Moror_5215 N 0.000
M408DRAFT_72496 Serendipita vermifera M408DRAFT_72496 N 0.000
FOMPIDRAFT_39384 Fomitopsis pinicola FOMPIDRAFT_39384 N 0.000
AGABI2DRAFT_180216 Agaricus bisporus AGABI2DRAFT_180216 N 0.000
A1Q1_01456 Trichosporon asahii A1Q1_01456 N 0.000
VDBG_08894 Verticillium albo atrum VDBG_08894 N 0.000