ONIVA06G30670 (Oryza nivara)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 ONIVA06G30670 T276336_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK02532.1
M02347_2.00 		Cannabis sativa
WAATATCTN
NAGATATTW		 PBM
Weirauch et al.(2014)
pTH9579 		0.891 0.978
RVE8
M01074_2.00 		Arabidopsis thaliana
NNNRWATCNN
NNGATWYNNN		 PBM
Sullivan et al.(2014)
pTH7136 		0.883 0.935
RVE8
M07069_2.00 		Arabidopsis thaliana
NHNWAAATATCT
AGATATTTWNDN		 Dap-seq
OMalley et al.(2016)
At3g09600_col_a 		0.883 0.935
RVE8
M07070_2.00 		Arabidopsis thaliana
NNWAAATATCT
AGATATTTWNN		 Dap-seq
OMalley et al.(2016)
At3g09600_colamp_a 		0.883 0.935
RVE4
M07117_2.00 		Arabidopsis thaliana
NNWAAATATCT
AGATATTTWNN		 Dap-seq
OMalley et al.(2016)
LCL1_colamp_a 		0.883 0.935
RVE4
M07118_2.00 		Arabidopsis thaliana
NAAAATATCT
AGATATTTTN		 Dap-seq
OMalley et al.(2016)
LCL1_col 		0.883 0.935
RVE6
M01081_2.00 		Arabidopsis thaliana
AATATCTD
HAGATATT		 PBM
Sullivan et al.(2014)
pTH7151 		0.881 0.957
RVE6
M07138_2.00 		Arabidopsis thaliana
NNAAAATATCT
AGATATTTTNN		 Dap-seq
OMalley et al.(2016)
At5g52660_col_a 		0.881 0.957
RVE6
M07139_2.00 		Arabidopsis thaliana
NNNWAAATATCT
AGATATTTWNNN		 Dap-seq
OMalley et al.(2016)
At5g52660_colamp_a 		0.881 0.957
mybG
M02319_2.00 		Dictyostelium discoideum
WAATATCT
AGATATTW		 PBM
Weirauch et al.(2014)
pTH5362 		0.800 0.848
RVE5
M01079_2.00 		Arabidopsis thaliana
NWAATATCHN
NDGATATTWN		 PBM
Sullivan et al.(2014)
pTH7138 		0.785 0.870
RVE5
M07100_2.00 		Arabidopsis thaliana
NNAAAATATCT
AGATATTTTNN		 Dap-seq
OMalley et al.(2016)
At4g01280_col_a 		0.785 0.870
RVE5
M07101_2.00 		Arabidopsis thaliana
NNWAAATATCT
AGATATTTWNN		 Dap-seq
OMalley et al.(2016)
At4g01280_colamp_a 		0.785 0.870
PK08316.1
M02350_2.00 		Cannabis sativa
NNNRWATCNN
NNGATWYNNN		 PBM
Weirauch et al.(2014)
pTH9488 		0.706 0.696
RVE1
M00879_2.00 		Arabidopsis thaliana
AAATATCT
AGATATTT		 PBM
Franco-Zorrilla et al.(2014)
RVE1 		0.670 0.652
RVE1
M07128_2.00 		Arabidopsis thaliana
NNNWAAATATCTNN
NNAGATATTTWNNN		 Dap-seq
OMalley et al.(2016)
RVE1_col_a 		0.670 0.652
RVE1
M07129_2.00 		Arabidopsis thaliana
NNWAATATCW
WGATATTWNN		 Dap-seq
OMalley et al.(2016)
RVE1_colamp_a 		0.670 0.652
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ONIVA06G30670.1 Myb 79 124

Links

Other Myb/SANT family TFs
Other Oryza nivara TFs

328 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
MTR_2g038000 Medicago truncatula MTR_2g038000 D 0.000
Ca_08838 Cicer arietinum Ca_08838 I 0.000
chr4.CM0244.10.nd Lotus japonicus chr4.CM0244.10.nd I 0.000
Thhalv10024489m.g Eutrema salsugineum Thhalv10024489m.g I 0.000
Gorai.009G002500 Gossypium raimondii Gorai.009G002500 I 0.000
gene17249-v1.0-hybrid Fragaria vesca gene17249-v1.0-hybrid I 0.000
Eucgr.C00114 Eucalyptus grandis Eucgr.C00114 I 0.000
Carubv10004175m.g Capsella rubella Carubv10004175m.g I 0.000
Cagra.0268s0009 Capsella grandiflora Cagra.0268s0009 I 0.000
Bostr.7867s0841 Boechera stricta Bostr.7867s0841 I 0.000
mgf003961m Mimulus guttatus mgf003961m I 0.000
cassava27173.m1 Manihot esculenta cassava27173.m1 I 0.000
29671.m000294 Ricinus communis 29671.m000294 I 0.000
Pm008905 Prunus mume Pm008905 I 0.000
PRH Arabidopsis thaliana AT4G29940 I 0.000
PRHA Arabidopsis lyrata scaffold_701235.1 I 0.000
PRUPE_ppa023964mg Prunus persica PRUPE_ppa023964mg I 0.000
GLYMA17G06690 Glycine max GLYMA17G06690 I 0.000
GLYMA15G17956 Glycine max GLYMA15G17956 I 0.000
GLYMA13G00540 Glycine max GLYMA13G00540 I 0.000
GLYMA09G06730 Glycine max GLYMA09G06730 I 0.000
Bra010310 Brassica rapa Bra010310 I 0.000
Bo3g175850 Brassica oleracea Bo3g175850 I 0.000
Bo1g014710 Brassica oleracea Bo1g014710 I 0.000
POPTR_0018s13920 Populus trichocarpa POPTR_0018s13920 N 0.000
POPTR_0006s07520 Populus trichocarpa POPTR_0006s07520 N 0.000
SapurV1A.0140s0170 Salix purpurea SapurV1A.0140s0170 N 0.000