ORGLA12G0066300 (Oryza glaberrima)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 ORGLA12G0066300 T276838_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Q948S5_TOBAC
M11074_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MYBA2_01 		0.771 0.856
PC-MYB1
M07110_2.00 		Arabidopsis thaliana
NDWWNTDRCCGTTRN
NYAACGGYHANWWHN		 Dap-seq
OMalley et al.(2016)
MYB3R1_col_a 		0.750 0.806
PC-MYB1
M07111_2.00 		Arabidopsis thaliana
DWHNTDRCCGTTR
YAACGGYHANDWH		 Dap-seq
OMalley et al.(2016)
MYB3R1_colamp_a 		0.750 0.806
PK12011.1
M01279_2.00 		Cannabis sativa
HAACGGHHNN
NNDDCCGTTD		 PBM
Lambert et al.(2019)
pTH11423 		0.726 0.849
MYB3R4
M07125_2.00 		Arabidopsis thaliana
NDWWNTDRCCGTTRN
NYAACGGYHANWWHN		 Dap-seq
OMalley et al.(2016)
MYB3R4_col_a 		0.712 0.791
MYB3R5
M07116_2.00 		Arabidopsis thaliana
NWWWWNTDRCCGTTR
YAACGGYHANWWWWN		 Dap-seq
OMalley et al.(2016)
MYB3R5_col_a 		0.675 0.777
Q948S6_TOBAC
M11075_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MYBA1_01 		0.667 0.770
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ORGLA12G0066300.1 Myb 55 101
ORGLA12G0066300.1 Myb 107 153
ORGLA12G0066300.1 Myb 159 203

Links

Other Myb/SANT family TFs
Other Oryza glaberrima TFs

154 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
THAP12 Gallus gallus ENSGALG00000000838 D
prkrirb Tetraodon nigroviridis ENSTNIG00000003292 D
THAP12 Homo sapiens ENSG00000137492 D
prkrirb Oryzias latipes ENSORLG00000005427 D
prkrirb Danio rerio ENSDARG00000020964 D
ENSPPYG00000003697 Pongo abelii ENSPPYG00000003697 I
THAP12 Taeniopygia guttata ENSTGUG00000013565 I
Thap12 Rattus norvegicus ENSRNOG00000053923 I
ENSPVAG00000011935 Pteropus vampyrus ENSPVAG00000011935 I
THAP12 Pan troglodytes ENSPTRG00000004091 I
ENSOCUG00000017323 Oryctolagus cuniculus ENSOCUG00000017323 I
ENSPFOG00000009414 Poecilia formosa ENSPFOG00000009414 I
ENSPCAG00000008407 Procavia capensis ENSPCAG00000008407 I
ENSPANG00000003101 Papio anubis ENSPANG00000003101 I
ENSONIG00000011168 Oreochromis niloticus ENSONIG00000011168 I
THAP12 Otolemur garnettii ENSOGAG00000001569 I
ENSOCUG00000021566 Oryctolagus cuniculus ENSOCUG00000021566 I
ENSOARG00000012702 Ovis aries ENSOARG00000012702 I
prkrirb Takifugu rubripes ENSTRUG00000007070 I
ENSTSYG00000000689 Tarsius syrichta ENSTSYG00000000689 I
THAP12 Tursiops truncatus ENSTTRG00000013287 I
ENSXMAG00000001706 Xiphophorus maculatus ENSXMAG00000001706 I
Aan_R009109 Calypte anna Aan_R009109 I
Afo_R006000 Aptenodytes forsteri Afo_R006000 I
Brh_R010409 Buceros rhinoceros Brh_R010409 I
Cmyd_10020724 Chelonia mydas Cmyd_10020724 I
ENSP00000260045-D1 Bos grunniens ENSP00000260045-D1 I
ENSP00000260045 Macaca fascicularis ENSP00000260045 I
Gfo_R003337 Geospiza fortis Gfo_R003337 I
Tal_R010930 Tyto alba Tal_R010930 I
thap12 Xenopus tropicalis XB-GENE-6073216 I
prkrirb Gasterosteus aculeatus ENSGACG00000010435 I
ENSAMXG00000002922 Astyanax mexicanus ENSAMXG00000002922 I
ENSAPLG00000010379 Anas platyrhynchos ENSAPLG00000010379 I
THAP12 Bos taurus ENSBTAG00000031609 I
THAP12 Canis familiaris ENSCAFG00000005274 I
ENSCHOG00000005539 Choloepus hoffmanni ENSCHOG00000005539 I
ENSCHOG00000007628 Choloepus hoffmanni ENSCHOG00000007628 I
ENSCHOG00000009417 Choloepus hoffmanni ENSCHOG00000009417 I
ENSCJAG00000012300 Callithrix jacchus ENSCJAG00000012300 I
THAP12 Cavia porcellus ENSCPOG00000013167 I
ENSCSAG00000003894 Chlorocebus sabaeus ENSCSAG00000003894 I
ENSDNOG00000031781 Dasypus novemcinctus ENSDNOG00000031781 I
ENSDORG00000007522 Dipodomys ordii ENSDORG00000007522 I
THAP12 Erinaceus europaeus ENSEEUG00000003060 I
ENSOCUG00000009178 Oryctolagus cuniculus ENSOCUG00000009178 I
ENSGGOG00000023767 Gorilla gorilla ENSGGOG00000023767 I
THAP12 Gorilla gorilla ENSGGOG00000024317 I
ENSLACG00000001033 Latimeria chalumnae ENSLACG00000001033 I
THAP12 Loxodonta africana ENSLAFG00000011743 I
ENSLOCG00000004788 Lepisosteus oculatus ENSLOCG00000004788 I
THAP12 Meleagris gallopavo ENSMGAG00000015267 I
ENSMLUG00000001341 Myotis lucifugus ENSMLUG00000001341 I
ENSMMUG00000022399 Macaca mulatta ENSMMUG00000022399 I
THAP12 Monodelphis domestica ENSMODG00000005315 I
Thap12 Mus musculus ENSMUSG00000030753 I
ENSNLEG00000005175 Nomascus leucogenys ENSNLEG00000005175 I
ENSAMEG00000016926 Ailuropoda melanoleuca ENSAMEG00000016926 I