CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PGSC0003DMG400028830
(
Solanum tuberosum
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00249 (Myb_DNA-binding)
IPR014778
PGSC0003DMG400028830
T277704_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PK05732.1
M01276_2.00
Cannabis sativa
HNATTCBNN
NNVGAATND
PBM
Lambert et al.(2019)
pTH11367
0.742
0.809
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PGSC0003DMT400074183
Myb
14
65
RLRWTPQLHHLFIQSVQNLGGRNKATPKRIVQMMAIKGLKISHVKSHLQMYR
Links
Other
Myb/SANT
family TFs
Other
Solanum tuberosum
TFs
21 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PRUPE_ppa006028mg
Prunus persica
PRUPE_ppa006028mg
N
Pm022530
Prunus mume
Pm022530
N