POPTR_0005s14470 (Populus trichocarpa)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 POPTR_0005s14470 T278284_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB113
M07026_2.00 		Arabidopsis thaliana
VTAACKRAHTH
DADTYMGTTAB		 Dap-seq
OMalley et al.(2016)
MYB113_col_a 		0.695 0.777
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0005s14470.1 Myb 9 56
POPTR_0005s14470.1 Myb 62 111

Links

Other Myb/SANT family TFs
Other Populus trichocarpa TFs

70 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ZNF8 Homo sapiens ENSG00000278129 D
ENSNLEG00000011130 Nomascus leucogenys ENSNLEG00000011130 I
ENSP00000196548 Macaca fascicularis ENSP00000196548 I
ZNF8 Tupaia belangeri ENSTBEG00000000043 I
ZNF8 Sorex araneus ENSSARG00000001458 I
Zfp128 Rattus norvegicus ENSRNOG00000031459 I
ZNF8 Pteropus vampyrus ENSPVAG00000002939 I
ZNF8 Pan troglodytes ENSPTRG00000011584 I
ENSPPYG00000010495 Pongo abelii ENSPPYG00000010495 I
ENSPANG00000001782 Papio anubis ENSPANG00000001782 I
ZNF8 Ochotona princeps ENSOPRG00000007396 I
ZNF8 Oryctolagus cuniculus ENSOCUG00000029759 I
ENSCAFG00000002372 Canis familiaris ENSCAFG00000002372 I
ENSMPUG00000008370 Mustela putorius furo ENSMPUG00000008370 I
ZNF8 Macaca mulatta ENSMMUG00000020508 I
ENSGGOG00000025136 Gorilla gorilla ENSGGOG00000025136 I
ENSGGOG00000023358 Gorilla gorilla ENSGGOG00000023358 I
ZNF8 Equus caballus ENSECAG00000013553 I
Zfp128 Dipodomys ordii ENSDORG00000013595 I
ENSCSAG00000001603 Chlorocebus sabaeus ENSCSAG00000001603 I
ZNF544 Callithrix jacchus ENSCJAG00000000329 I
ZNF8 Choloepus hoffmanni ENSCHOG00000003202 I