MYB113 (Arabidopsis thaliana)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 AT1G66370 T266358_2.00 Ensembl (2018-Dec-8) Link out
NCBI Gene Info:
Encodes a MYB-domain protein involved in specification of the leaf proximodistal axis. Mutation results in lobed and dissected leaves with a characteristic asymmetry. Homologous to the Antirrhinum PHANTASTICA (PHAN) and maize ROUGH SHEATH2 (RS2) genes Asymmetric placement of auxin response at the distal leaf tip precedes visible asymmetric leaf growth. Acts alongside AXR1 to exclude BP expression in leaves and with PIN1 to repress BP and promote lateral organ growth. Interacts physically with AS2 to form a complex that binds to the BP promoter and silences BP. Also functions as a regulator of the plant immune response.

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB113
M07026_2.00		 Arabidopsis thaliana
VTAACKRAHTH
DADTYMGTTAB		 Dap-seq
OMalley et al.(2016)
MYB113_col_a		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AT1G66370.1 Myb 10 57
AT1G66370.1 Myb 63 108

Links

Other Myb/SANT family TFs
Other Arabidopsis thaliana TFs

123 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
MYB75 Arabidopsis thaliana AT1G56650 I 0.872
Bo6g099880 Brassica oleracea Bo6g099880 I 0.859
Thhalv10019041m.g Eutrema salsugineum Thhalv10019041m.g I 0.859
MYB114 Arabidopsis thaliana AT1G66380 I 0.859
Cagra.2400s0001 Capsella grandiflora Cagra.2400s0001 I 0.857
Carubv10020856m.g Capsella rubella Carubv10020856m.g I 0.857
Bra004162 Brassica rapa Bra004162 I 0.856
MYB113 Arabidopsis lyrata fgenesh2_kg.2__869__AT1G66370.1 I 0.856
Bo6g100940 Brassica oleracea Bo6g100940 I 0.856
PAP1 Arabidopsis lyrata fgenesh2_kg.1__4777__AT1G56650.1 I 0.855
Bra039763 Brassica rapa Bra039763 I 0.848
Bra001917 Brassica rapa Bra001917 I 0.848
Bo00835s060 Brassica oleracea Bo00835s060 I 0.848
ATMYB90 Arabidopsis lyrata scaffold_201358.1 I 0.843
Bostr.26959s0279 Boechera stricta Bostr.26959s0279 I 0.840
scaffold_201357.1 Arabidopsis lyrata scaffold_201357.1 I 0.836
Solyc10g086270.1 Solanum lycopersicum Solyc10g086270.1 I 0.835
Cagra.2629s0007 Capsella grandiflora Cagra.2629s0007 I 0.835
Solyc10g086290.1 Solanum lycopersicum Solyc10g086290.1 I 0.831
MYB90 Arabidopsis thaliana AT1G66390 I 0.826
Solyc10g086260.1 Solanum lycopersicum Solyc10g086260.1 I 0.818
Cagra.0463s0008 Capsella grandiflora Cagra.0463s0008 I 0.818
TCM_019192 Theobroma cacao TCM_019192 I 0.816
Gorai.001G087200 Gossypium raimondii Gorai.001G087200 I 0.816
Gorai.001G087400 Gossypium raimondii Gorai.001G087400 I 0.816
scaffold_201356.1 Arabidopsis lyrata scaffold_201356.1 I 0.814
Solyc10g086250.1 Solanum lycopersicum Solyc10g086250.1 I 0.812
Ciclev10013455m.g Citrus clementina Ciclev10013455m.g I 0.811
PK05760.1 Cannabis sativa PK05760.1 I 0.810
VIT_14s0006g01290 Vitis vinifera VIT_14s0006g01290 I 0.804
Pm029445 Prunus mume Pm029445 I 0.801
fgenesh1_pg.C_scaffold_2000950 Arabidopsis lyrata fgenesh1_pg.C_scaffold_2000950 I 0.796
Carubv10020888m.g Capsella rubella Carubv10020888m.g I 0.796
Cagra.0463s0007 Capsella grandiflora Cagra.0463s0007 I 0.794
VIT_02s0033g00410 Vitis vinifera VIT_02s0033g00410 I 0.789
VIT_02s0033g00450 Vitis vinifera VIT_02s0033g00450 I 0.789
Cagra.0463s0006 Capsella grandiflora Cagra.0463s0006 I 0.788
VIT_02s0033g00400 Vitis vinifera VIT_02s0033g00400 I 0.786
mgf019317m Mimulus guttatus mgf019317m I 0.785
evm.TU.supercontig_116.38 Carica papaya evm.TU.supercontig_116.38 I 0.784
evm.TU.supercontig_2742.1 Carica papaya evm.TU.supercontig_2742.1 I 0.784
PK17827.1 Cannabis sativa PK17827.1 I 0.781
MTR_5g079290 Medicago truncatula MTR_5g079290 I 0.779
27763.m000042 Ricinus communis 27763.m000042 I 0.777
MTR_5g078950 Medicago truncatula MTR_5g078950 I 0.773
MTR_5g078860 Medicago truncatula MTR_5g078860 I 0.773
Pm029442 Prunus mume Pm029442 I 0.773
MTR_5g079220 Medicago truncatula MTR_5g079220 I 0.768
Pm029440 Prunus mume Pm029440 I 0.768
MTR_8g060940 Medicago truncatula MTR_8g060940 I 0.767
VIT_02s0033g00430 Vitis vinifera VIT_02s0033g00430 I 0.765
PRUPE_ppa026640mg Prunus persica PRUPE_ppa026640mg I 0.765
VIT_02s0033g00390 Vitis vinifera VIT_02s0033g00390 I 0.765
MTR_5g078800 Medicago truncatula MTR_5g078800 I 0.764
MTR_0001s0360 Medicago truncatula MTR_0001s0360 I 0.763
MTR_5g078910 Medicago truncatula MTR_5g078910 I 0.761
Lus10042522.g Linum usitatissimum Lus10042522.g I 0.760
MTR_5g078930 Medicago truncatula MTR_5g078930 I 0.758
MTR_5g079120 Medicago truncatula MTR_5g079120 I 0.754
TCM_026054 Theobroma cacao TCM_026054 I 0.748
Eucgr.H04157 Eucalyptus grandis Eucgr.H04157 I 0.747
gene31413-v1.0-hybrid Fragaria vesca gene31413-v1.0-hybrid I 0.746
VIT_14s0006g01280 Vitis vinifera VIT_14s0006g01280 I 0.746
Aquca_047_00006 Aquilegia coerulea Aquca_047_00006 I 0.745
MTR_7g017260 Medicago truncatula MTR_7g017260 I 0.742
GLYMA09G36966 Glycine max GLYMA09G36966 I 0.741
Gorai.007G268800 Gossypium raimondii Gorai.007G268800 I 0.741
Gorai.013G118300 Gossypium raimondii Gorai.013G118300 I 0.739
chr1.CM0141.350.nd Lotus japonicus chr1.CM0141.350.nd I 0.738
Lus10028514.g Linum usitatissimum Lus10028514.g I 0.736
Lus10009129.g Linum usitatissimum Lus10009129.g I 0.736
Lus10009130.g Linum usitatissimum Lus10009130.g I 0.735
Lus10028513.g Linum usitatissimum Lus10028513.g I 0.735
MDP0000192051 Malus domestica MDP0000192051 I 0.733
Ca_22078 Cicer arietinum Ca_22078 I 0.732
30128.m008730 Ricinus communis 30128.m008730 I 0.732
Aquca_015_00088 Aquilegia coerulea Aquca_015_00088 I 0.729
GLYMA18G49690 Glycine max GLYMA18G49690 I 0.728
Ca_19630 Cicer arietinum Ca_19630 I 0.724
MTR_0197s0010 Medicago truncatula MTR_0197s0010 I 0.724
chr1.LjT44L17.240.nd Lotus japonicus chr1.LjT44L17.240.nd I 0.724
GLYMA18G41520 Glycine max GLYMA18G41520 I 0.724
Eucgr.F02842 Eucalyptus grandis Eucgr.F02842 I 0.723
PRUPE_ppa010069mg Prunus persica PRUPE_ppa010069mg I 0.722
MTR_0247s0040 Medicago truncatula MTR_0247s0040 I 0.722
Eucgr.J01586 Eucalyptus grandis Eucgr.J01586 I 0.721
Eucgr.J01580 Eucalyptus grandis Eucgr.J01580 I 0.721
GLYMA07G16980 Glycine max GLYMA07G16980 I 0.720
PRUPE_ppa016711mg Prunus persica PRUPE_ppa016711mg I 0.720
mgf022565m Mimulus guttatus mgf022565m I 0.717
Cucsa.277570 Cucumis sativus Cucsa.277570 I 0.716
POPTR_0005s14480 Populus trichocarpa POPTR_0005s14480 I 0.714
VIT_14s0006g01340 Vitis vinifera VIT_14s0006g01340 I 0.712
Eucgr.J01553 Eucalyptus grandis Eucgr.J01553 I 0.711
Eucgr.J01569 Eucalyptus grandis Eucgr.J01569 I 0.711
evm.TU.contig_42663.2 Carica papaya evm.TU.contig_42663.2 I 0.703
MDP0000478453 Malus domestica MDP0000478453 I 0.701
evm.TU.supercontig_51.67 Carica papaya evm.TU.supercontig_51.67 I 0.700
Eucgr.J01573 Eucalyptus grandis Eucgr.J01573 I 0.700
Eucgr.J01578 Eucalyptus grandis Eucgr.J01578 I 0.700
Eucgr.J01555 Eucalyptus grandis Eucgr.J01555 I 0.700
Eucgr.J01576 Eucalyptus grandis Eucgr.J01576 I 0.698
POPTR_0005s14460 Populus trichocarpa POPTR_0005s14460 I 0.695
GLYMA09G37010 Glycine max GLYMA09G37010 I 0.695
POPTR_0005s14470 Populus trichocarpa POPTR_0005s14470 I 0.695
POPTR_0005s14450 Populus trichocarpa POPTR_0005s14450 I 0.694
GLYMA19G02980 Glycine max GLYMA19G02980 I 0.693
PRUPE_ppa020385mg Prunus persica PRUPE_ppa020385mg I 0.692
Pm031337 Prunus mume Pm031337 I 0.692
Pm025429 Prunus mume Pm025429 I 0.692
MTR_0193s0090 Medicago truncatula MTR_0193s0090 I 0.690
SapurV1A.0230s0240 Salix purpurea SapurV1A.0230s0240 I 0.689
PDK_20s1447601g001 Phoenix dactylifera PDK_20s1447601g001 I 0.688
SapurV1A.0230s0260 Salix purpurea SapurV1A.0230s0260 I 0.686
Aquca_015_00090 Aquilegia coerulea Aquca_015_00090 I 0.683
GLYMA09G36983 Glycine max GLYMA09G36983 I 0.681
Eucgr.J01574 Eucalyptus grandis Eucgr.J01574 I 0.679
GLYMA18G49670 Glycine max GLYMA18G49670 I 0.679
Lus10003277.g Linum usitatissimum Lus10003277.g I 0.679
Aquca_015_00085 Aquilegia coerulea Aquca_015_00085 I 0.670
SapurV1A.0230s0250 Salix purpurea SapurV1A.0230s0250 I 0.664
POPTR_0005s14490 Populus trichocarpa POPTR_0005s14490 I 0.664
cassava36364.valid.m1 Manihot esculenta cassava36364.valid.m1 I 0.661