Gorai.013G118300 (Gossypium raimondii)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Gorai.013G118300 T287817_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB113
M07026_2.00 		Arabidopsis thaliana
VTAACKRAHTH
DADTYMGTTAB		 Dap-seq
OMalley et al.(2016)
MYB113_col_a 		0.739 0.731
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.013G118300.1 Myb 3 50
Gorai.013G118300.1 Myb 56 101
Gorai.013G118300.2 Myb 3 50
Gorai.013G118300.2 Myb 56 94
Gorai.013G118300.3 Myb 6 27
Gorai.013G118300.3 Myb 33 78

Links

Other Myb/SANT family TFs
Other Gossypium raimondii TFs

161 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Gorai.007G268800 Gossypium raimondii Gorai.007G268800 I 0.841
TCM_026054 Theobroma cacao TCM_026054 I 0.834
Lus10042522.g Linum usitatissimum Lus10042522.g I 0.828
Eucgr.H04157 Eucalyptus grandis Eucgr.H04157 I 0.827
TCM_019192 Theobroma cacao TCM_019192 I 0.803
Gorai.001G087200 Gossypium raimondii Gorai.001G087200 I 0.803
Gorai.001G087400 Gossypium raimondii Gorai.001G087400 I 0.803
chr1.LjT44L17.240.nd Lotus japonicus chr1.LjT44L17.240.nd I 0.800
MYB114 Arabidopsis thaliana AT1G66380 I 0.799
Bostr.3125s0001 Boechera stricta Bostr.3125s0001 N 0.799
GLYMA07G16980 Glycine max GLYMA07G16980 I 0.794
GLYMA18G41520 Glycine max GLYMA18G41520 I 0.794
MTR_0197s0010 Medicago truncatula MTR_0197s0010 I 0.791
Ca_19630 Cicer arietinum Ca_19630 I 0.791
Cucsa.277570 Cucumis sativus Cucsa.277570 I 0.789
Ciclev10013455m.g Citrus clementina Ciclev10013455m.g I 0.788
Al_scaffold_0002_1204 Arabidopsis lyrata Al_scaffold_0002_1204 N 0.784
VIT_02s0033g00460 Vitis vinifera VIT_02s0033g00460 N 0.769
Pm029440 Prunus mume Pm029440 I 0.765
Cagra.2629s0007 Capsella grandiflora Cagra.2629s0007 I 0.765
Solyc10g086290.1 Solanum lycopersicum Solyc10g086290.1 I 0.764
PK05760.1 Cannabis sativa PK05760.1 I 0.764
MYB75 Arabidopsis thaliana AT1G56650 I 0.763
PAP1 Arabidopsis lyrata fgenesh2_kg.1__4777__AT1G56650.1 I 0.763
Bo6g100940 Brassica oleracea Bo6g100940 I 0.762
Pm029442 Prunus mume Pm029442 I 0.762
Pm029445 Prunus mume Pm029445 I 0.762
Bostr.26959s0279 Boechera stricta Bostr.26959s0279 I 0.762
Solyc10g086270.1 Solanum lycopersicum Solyc10g086270.1 I 0.761
MYB90 Arabidopsis thaliana AT1G66390 I 0.759
Bo6g099880 Brassica oleracea Bo6g099880 I 0.759
Bra004162 Brassica rapa Bra004162 I 0.759
ATMYB90 Arabidopsis lyrata scaffold_201358.1 I 0.759
Lus10003277.g Linum usitatissimum Lus10003277.g I 0.759
Thhalv10019041m.g Eutrema salsugineum Thhalv10019041m.g I 0.759
27763.m000042 Ricinus communis 27763.m000042 I 0.757
Pm029438 Prunus mume Pm029438 N 0.755
Solyc10g086250.1 Solanum lycopersicum Solyc10g086250.1 I 0.754
mgf019317m Mimulus guttatus mgf019317m I 0.754
scaffold_201357.1 Arabidopsis lyrata scaffold_201357.1 I 0.753
Ca_22078 Cicer arietinum Ca_22078 I 0.753
MTR_5g078950 Medicago truncatula MTR_5g078950 I 0.752
PRUPE_ppa026640mg Prunus persica PRUPE_ppa026640mg I 0.751
Bra001917 Brassica rapa Bra001917 I 0.749
PRUPE_ppa010069mg Prunus persica PRUPE_ppa010069mg I 0.749
Bo00835s060 Brassica oleracea Bo00835s060 I 0.748
Bra039763 Brassica rapa Bra039763 I 0.748
MDP0000192051 Malus domestica MDP0000192051 I 0.745
Solyc10g086260.1 Solanum lycopersicum Solyc10g086260.1 I 0.744
Cagra.2400s0001 Capsella grandiflora Cagra.2400s0001 I 0.742
Carubv10020856m.g Capsella rubella Carubv10020856m.g I 0.742
VIT_02s0033g00410 Vitis vinifera VIT_02s0033g00410 I 0.740
VIT_02s0033g00450 Vitis vinifera VIT_02s0033g00450 I 0.740
MYB113 Arabidopsis thaliana AT1G66370 D 0.739
MTR_8g060940 Medicago truncatula MTR_8g060940 I 0.739
evm.TU.supercontig_51.67 Carica papaya evm.TU.supercontig_51.67 I 0.739
MTR_5g079290 Medicago truncatula MTR_5g079290 I 0.737
evm.TU.supercontig_116.38 Carica papaya evm.TU.supercontig_116.38 I 0.733
evm.TU.supercontig_2742.1 Carica papaya evm.TU.supercontig_2742.1 I 0.733
Cagra.0463s0006 Capsella grandiflora Cagra.0463s0006 I 0.732
MTR_5g079220 Medicago truncatula MTR_5g079220 I 0.731
VIT_14s0006g01290 Vitis vinifera VIT_14s0006g01290 I 0.731
gene31413-v1.0-hybrid Fragaria vesca gene31413-v1.0-hybrid I 0.729
MYB113 Arabidopsis lyrata fgenesh2_kg.2__869__AT1G66370.1 I 0.726
MTR_0001s0360 Medicago truncatula MTR_0001s0360 I 0.726
MTR_5g078800 Medicago truncatula MTR_5g078800 I 0.726
Eucgr.D02099 Eucalyptus grandis Eucgr.D02099 N 0.726
PDK_20s1376841g001 Phoenix dactylifera PDK_20s1376841g001 N 0.726
WER Arabidopsis thaliana AT5G14750 D 0.725
MTR_5g078860 Medicago truncatula MTR_5g078860 I 0.725
MTR_5g078910 Medicago truncatula MTR_5g078910 I 0.723
Lus10009130.g Linum usitatissimum Lus10009130.g I 0.722
Lus10028513.g Linum usitatissimum Lus10028513.g I 0.722
MDP0000475808 Malus domestica MDP0000475808 N 0.722
Cagra.0463s0007 Capsella grandiflora Cagra.0463s0007 I 0.721
PK17827.1 Cannabis sativa PK17827.1 I 0.719
VIT_02s0033g00390 Vitis vinifera VIT_02s0033g00390 I 0.717
GLYMA09G36966 Glycine max GLYMA09G36966 I 0.714
GLYMA18G49690 Glycine max GLYMA18G49690 I 0.714
POPTR_0006s23810 Populus trichocarpa POPTR_0006s23810 I 0.714
Eucgr.J01580 Eucalyptus grandis Eucgr.J01580 I 0.714
TT2 Arabidopsis thaliana AT5G35550 I 0.713
MTR_5g079120 Medicago truncatula MTR_5g079120 I 0.713
Carubv10020888m.g Capsella rubella Carubv10020888m.g I 0.712
Gorai.013G139200 Gossypium raimondii Gorai.013G139200 I 0.711
Cucsa.061660 Cucumis sativus Cucsa.061660 I 0.710
Eucgr.J01586 Eucalyptus grandis Eucgr.J01586 I 0.710
Bo5g131980 Brassica oleracea Bo5g131980 N 0.708
Aquca_047_00006 Aquilegia coerulea Aquca_047_00006 I 0.708
BGIOSGA037085 Oryza indica BGIOSGA037085 N 0.706
PRUPE_ppa008906mg Prunus persica PRUPE_ppa008906mg I 0.706
PRUPE_ppa016711mg Prunus persica PRUPE_ppa016711mg I 0.706
evm.TU.contig_33658 Carica papaya evm.TU.contig_33658 N 0.706
Lus10009129.g Linum usitatissimum Lus10009129.g I 0.706
Lus10028514.g Linum usitatissimum Lus10028514.g I 0.706
orange1.1g044587m.g Citrus sinensis orange1.1g044587m.g N 0.706
Cagra.0463s0008 Capsella grandiflora Cagra.0463s0008 I 0.705
MTR_7g017260 Medicago truncatula MTR_7g017260 I 0.704
Eucgr.J01553 Eucalyptus grandis Eucgr.J01553 I 0.704
Eucgr.J01569 Eucalyptus grandis Eucgr.J01569 I 0.704
Eucgr.J01576 Eucalyptus grandis Eucgr.J01576 I 0.704
chr1.CM0141.350.nd Lotus japonicus chr1.CM0141.350.nd I 0.702
MDP0000478453 Malus domestica MDP0000478453 I 0.701
fgenesh1_pg.C_scaffold_2000950 Arabidopsis lyrata fgenesh1_pg.C_scaffold_2000950 I 0.696
VIT_02s0033g00400 Vitis vinifera VIT_02s0033g00400 I 0.695
VIT_02s0033g00430 Vitis vinifera VIT_02s0033g00430 I 0.695
PDK_20s1415541g003 Phoenix dactylifera PDK_20s1415541g003 N 0.694
Eucgr.F02842 Eucalyptus grandis Eucgr.F02842 I 0.693
Eucgr.J01555 Eucalyptus grandis Eucgr.J01555 I 0.693
Eucgr.J01573 Eucalyptus grandis Eucgr.J01573 I 0.693
Eucgr.J01578 Eucalyptus grandis Eucgr.J01578 I 0.693
SapurV1A.0263s0400 Salix purpurea SapurV1A.0263s0400 I 0.693
scaffold_201356.1 Arabidopsis lyrata scaffold_201356.1 I 0.690
VIT_14s0006g01280 Vitis vinifera VIT_14s0006g01280 I 0.687
Gorai.008G192900 Gossypium raimondii Gorai.008G192900 I 0.686
MTR_7g111290 Medicago truncatula MTR_7g111290 I 0.684
TCM_013983 Theobroma cacao TCM_013983 I 0.683
SapurV1A.0552s0030 Salix purpurea SapurV1A.0552s0030 I 0.683
PRUPE_ppa020385mg Prunus persica PRUPE_ppa020385mg I 0.681
mgf001247m Mimulus guttatus mgf001247m N 0.679
Aquca_015_00090 Aquilegia coerulea Aquca_015_00090 I 0.679
MYB86 Arabidopsis thaliana AT5G26660 I 0.678
SapurV1A.0177s0130 Salix purpurea SapurV1A.0177s0130 I 0.678
Cagra.1390s0010 Capsella grandiflora Cagra.1390s0010 I 0.677
GRMZM2G001223 Zea mays GRMZM2G001223 I 0.675
Traes_3DL_75F8A05CF Triticum aestivum Traes_3DL_75F8A05CF N 0.675
Pavir.Fa00877 Panicum virgatum Pavir.Fa00877 I 0.675
MYB94 Arabidopsis thaliana AT3G47600 D 0.674
MTR_5g078930 Medicago truncatula MTR_5g078930 I 0.674
Traes_5AS_D9A4C1AB0 Triticum aestivum Traes_5AS_D9A4C1AB0 N 0.674
gene08694-v1.0-hybrid Fragaria vesca gene08694-v1.0-hybrid I 0.674
Pavir.Ha00303 Panicum virgatum Pavir.Ha00303 I 0.674
Pavir.J19088 Panicum virgatum Pavir.J19088 N 0.674
GLYMA16G00920 Glycine max GLYMA16G00920 I 0.673
MLOC_17928 Hordeum vulgare MLOC_17928 I 0.673
Pm025429 Prunus mume Pm025429 I 0.673
Pm031337 Prunus mume Pm031337 I 0.673
Cagra.17198s0001 Capsella grandiflora Cagra.17198s0001 N 0.673
BGIOSGA027658 Oryza indica BGIOSGA027658 N 0.672
Bra009910 Brassica rapa Bra009910 N 0.672
Eucgr.J01574 Eucalyptus grandis Eucgr.J01574 I 0.672
MDP0000153773 Malus domestica MDP0000153773 N 0.671
GLYMA09G37010 Glycine max GLYMA09G37010 I 0.668
POPTR_0005s14480 Populus trichocarpa POPTR_0005s14480 I 0.668
TCM_005371 Theobroma cacao TCM_005371 I 0.668
Ciclev10020307m.g Citrus clementina Ciclev10020307m.g I 0.668
TRIUR3_32110 Triticum urartu TRIUR3_32110 N 0.667
SapurV1A.0093s0250 Salix purpurea SapurV1A.0093s0250 I 0.666
GLYMA08G44950 Glycine max GLYMA08G44950 N 0.665
GLYMA19G02980 Glycine max GLYMA19G02980 I 0.665
30128.m008730 Ricinus communis 30128.m008730 I 0.665
mgf022565m Mimulus guttatus mgf022565m I 0.664
Aquca_015_00088 Aquilegia coerulea Aquca_015_00088 I 0.664
VIT_14s0006g01340 Vitis vinifera VIT_14s0006g01340 I 0.663
cassava36364.valid.m1 Manihot esculenta cassava36364.valid.m1 I 0.663
SapurV1A.0230s0240 Salix purpurea SapurV1A.0230s0240 I 0.663
Pavir.J24653 Panicum virgatum Pavir.J24653 N 0.662
PDK_20s1933711g001 Phoenix dactylifera PDK_20s1933711g001 N 0.662
mgf026463m Mimulus guttatus mgf026463m N 0.661
PDK_20s1447601g001 Phoenix dactylifera PDK_20s1447601g001 I 0.661