CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pm029438
(
Prunus mume
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00249 (Myb_DNA-binding)
IPR014778
Pm029438
T283650_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pm029438
Myb
2
20
DAGLYRCRKSCRLRWLNYL
Pm029438
Myb
26
71
RGEFTEDEVDLLIRLHKLLGNRWSLIAGRLPGRTSNGVKNYWNTRL
Links
Other
Myb/SANT
family TFs
Other
Prunus mume
TFs
87 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Al_scaffold_0002_1204
Arabidopsis lyrata
Al_scaffold_0002_1204
N
0.800
MYB114
Arabidopsis thaliana
AT1G66380
I
0.798
Bostr.3125s0001
Boechera stricta
Bostr.3125s0001
N
0.798
WER
Arabidopsis thaliana
AT5G14750
D
0.771
Eucgr.D02099
Eucalyptus grandis
Eucgr.D02099
N
0.757
VIT_02s0033g00460
Vitis vinifera
VIT_02s0033g00460
N
0.756
Gorai.013G118300
Gossypium raimondii
Gorai.013G118300
I
0.755
PDK_20s1376841g001
Phoenix dactylifera
PDK_20s1376841g001
N
0.753
Gorai.013G139200
Gossypium raimondii
Gorai.013G139200
I
0.751
POPTR_0006s23810
Populus trichocarpa
POPTR_0006s23810
I
0.748
Cucsa.061660
Cucumis sativus
Cucsa.061660
I
0.747
BGIOSGA037085
Oryza indica
BGIOSGA037085
N
0.734
evm.TU.contig_33658
Carica papaya
evm.TU.contig_33658
N
0.732
PRUPE_ppa008906mg
Prunus persica
PRUPE_ppa008906mg
I
0.732
SapurV1A.0263s0400
Salix purpurea
SapurV1A.0263s0400
I
0.730
orange1.1g044587m.g
Citrus sinensis
orange1.1g044587m.g
N
0.729
PDK_20s1415541g003
Phoenix dactylifera
PDK_20s1415541g003
N
0.722
MDP0000475808
Malus domestica
MDP0000475808
N
0.718
MTR_7g111290
Medicago truncatula
MTR_7g111290
I
0.717
PDK_20s1528141g001
Phoenix dactylifera
PDK_20s1528141g001
N
0.716
GLYMA16G00920
Glycine max
GLYMA16G00920
I
0.715
TT2
Arabidopsis thaliana
AT5G35550
I
0.709
GRMZM2G001223
Zea mays
GRMZM2G001223
I
0.705
MYB94
Arabidopsis thaliana
AT3G47600
D
0.705
Pavir.Ha00303
Panicum virgatum
Pavir.Ha00303
I
0.699
Bo5g131980
Brassica oleracea
Bo5g131980
N
0.698
Traes_5AS_D9A4C1AB0
Triticum aestivum
Traes_5AS_D9A4C1AB0
N
0.698
mgf001247m
Mimulus guttatus
mgf001247m
N
0.698
Sb08g018580
Sorghum bicolor
Sb08g018580
I
0.697
OGLUM12G17720
Oryza glumaepatula
OGLUM12G17720
N
0.697
GRMZM2G130149
Zea mays
GRMZM2G130149
I
0.697
OBART12G16130
Oryza barthii
OBART12G16130
N
0.697
Cagra.2519s0060
Capsella grandiflora
Cagra.2519s0060
N
0.696
BRADI4G09490
Brachypodium distachyon
BRADI4G09490
N
0.694
MYB86
Arabidopsis thaliana
AT5G26660
I
0.694
cassava11833.valid.m1
Manihot esculenta
cassava11833.valid.m1
N
0.694
Cagra.1390s0010
Capsella grandiflora
Cagra.1390s0010
I
0.693
SapurV1A.0552s0030
Salix purpurea
SapurV1A.0552s0030
I
0.691
TCM_013983
Theobroma cacao
TCM_013983
I
0.689
SapurV1A.0177s0130
Salix purpurea
SapurV1A.0177s0130
I
0.688
Pavir.J24653
Panicum virgatum
Pavir.J24653
N
0.687
GRMZM2G032180
Zea mays
GRMZM2G032180
N
0.686
Pavir.Ia02093
Panicum virgatum
Pavir.Ia02093
N
0.685
ATMYB48
Arabidopsis thaliana
AT3G46130
I
0.683
Cagra.10637s0001
Capsella grandiflora
Cagra.10637s0001
I
0.683
Bostr.18473s0331
Boechera stricta
Bostr.18473s0331
I
0.683
GRMZM2G106558
Zea mays
GRMZM2G106558
I
0.681
MYB27
Arabidopsis thaliana
AT3G53200
D
0.681
Gorai.008G192900
Gossypium raimondii
Gorai.008G192900
I
0.680
PDK_20s1354851g002
Phoenix dactylifera
PDK_20s1354851g002
N
0.680
BRADI2G11080
Brachypodium distachyon
BRADI2G11080
I
0.680
Pavir.Fa00877
Panicum virgatum
Pavir.Fa00877
I
0.680
MLOC_16981
Hordeum vulgare
MLOC_16981
I
0.679
Traes_5AS_7D519210E
Triticum aestivum
Traes_5AS_7D519210E
N
0.679
TCM_021433
Theobroma cacao
TCM_021433
I
0.679
Traes_5BS_D1C03C165
Triticum aestivum
Traes_5BS_D1C03C165
N
0.679
Traes_5DS_1EF547639
Triticum aestivum
Traes_5DS_1EF547639
N
0.679
PK27824.1
Cannabis sativa
PK27824.1
N
0.679
BGIOSGA027658
Oryza indica
BGIOSGA027658
N
0.679
MLOC_17928
Hordeum vulgare
MLOC_17928
I
0.679
Gorai.001G268000
Gossypium raimondii
Gorai.001G268000
I
0.678
TRIUR3_12300
Triticum urartu
TRIUR3_12300
N
0.678
SapurV1A.0040s0010
Salix purpurea
SapurV1A.0040s0010
I
0.674
Cucsa.379880
Cucumis sativus
Cucsa.379880
I
0.674
SapurV1A.0489s0220
Salix purpurea
SapurV1A.0489s0220
I
0.674
Gorai.001G107900
Gossypium raimondii
Gorai.001G107900
I
0.674
Cagra.1317s0038
Capsella grandiflora
Cagra.1317s0038
N
0.674
Bostr.26833s0259
Boechera stricta
Bostr.26833s0259
N
0.674
Thhalv10014524m.g
Eutrema salsugineum
Thhalv10014524m.g
I
0.674
gene13970-v1.0-hybrid
Fragaria vesca
gene13970-v1.0-hybrid
N
0.674
MYB59
Arabidopsis thaliana
AT5G59780
D
0.674
Eucgr.J02073
Eucalyptus grandis
Eucgr.J02073
N
0.674
TCM_005371
Theobroma cacao
TCM_005371
I
0.672
BGIOSGA013008
Oryza indica
BGIOSGA013008
N
0.671
GLYMA08G44950
Glycine max
GLYMA08G44950
N
0.670
Pavir.J23620
Panicum virgatum
Pavir.J23620
N
0.669
Pavir.J19088
Panicum virgatum
Pavir.J19088
N
0.669
BGIOSGA002307
Oryza indica
BGIOSGA002307
N
0.668
MYB24
Arabidopsis thaliana
AT5G40350
D
0.668
MYB21
Arabidopsis thaliana
AT3G27810
I
0.668
Bra009910
Brassica rapa
Bra009910
N
0.668
Ciclev10020307m.g
Citrus clementina
Ciclev10020307m.g
I
0.667
Cagra.17198s0001
Capsella grandiflora
Cagra.17198s0001
N
0.667
LjSGA_148662.1
Lotus japonicus
LjSGA_148662.1
N
0.667
Si003873m.g
Setaria italica
Si003873m.g
N
0.666
MTR_4g063100
Medicago truncatula
MTR_4g063100
I
0.664
TRIUR3_32110
Triticum urartu
TRIUR3_32110
N
0.663