chr1.CM0141.350.nd (Lotus japonicus)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 chr1.CM0141.350.nd T290654_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB113
M07026_2.00 		Arabidopsis thaliana
VTAACKRAHTH
DADTYMGTTAB		 Dap-seq
OMalley et al.(2016)
MYB113_col_a 		0.738 0.774
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
chr1.CM0141.350.nd Myb 9 56
chr1.CM0141.350.nd Myb 62 107

Links

Other Myb/SANT family TFs
Other Lotus japonicus TFs

107 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GLYMA09G36966 Glycine max GLYMA09G36966 I 0.830
GLYMA18G49690 Glycine max GLYMA18G49690 I 0.830
GLYMA09G37010 Glycine max GLYMA09G37010 I 0.815
Ca_22078 Cicer arietinum Ca_22078 I 0.809
GLYMA18G49670 Glycine max GLYMA18G49670 I 0.799
Solyc10g086250.1 Solanum lycopersicum Solyc10g086250.1 I 0.774
Solyc10g086260.1 Solanum lycopersicum Solyc10g086260.1 I 0.774
Solyc10g086270.1 Solanum lycopersicum Solyc10g086270.1 I 0.774
Solyc10g086290.1 Solanum lycopersicum Solyc10g086290.1 I 0.774
Pm029445 Prunus mume Pm029445 I 0.773
27763.m000042 Ricinus communis 27763.m000042 I 0.761
GLYMA09G36983 Glycine max GLYMA09G36983 I 0.760
PRUPE_ppa020385mg Prunus persica PRUPE_ppa020385mg I 0.758
VIT_14s0006g01290 Vitis vinifera VIT_14s0006g01290 I 0.758
PK05760.1 Cannabis sativa PK05760.1 I 0.758
Cagra.2400s0001 Capsella grandiflora Cagra.2400s0001 I 0.756
Carubv10020856m.g Capsella rubella Carubv10020856m.g I 0.756
TCM_019192 Theobroma cacao TCM_019192 I 0.755
Pm029442 Prunus mume Pm029442 I 0.754
PRUPE_ppa026640mg Prunus persica PRUPE_ppa026640mg I 0.752
Pm029440 Prunus mume Pm029440 I 0.751
gene31413-v1.0-hybrid Fragaria vesca gene31413-v1.0-hybrid I 0.751
Cagra.2629s0007 Capsella grandiflora Cagra.2629s0007 I 0.749
Gorai.001G087200 Gossypium raimondii Gorai.001G087200 I 0.749
Gorai.001G087400 Gossypium raimondii Gorai.001G087400 I 0.749
Bo6g100940 Brassica oleracea Bo6g100940 I 0.746
Bostr.26959s0279 Boechera stricta Bostr.26959s0279 I 0.746
MTR_8g060940 Medicago truncatula MTR_8g060940 I 0.744
MYB75 Arabidopsis thaliana AT1G56650 I 0.743
MYB114 Arabidopsis thaliana AT1G66380 I 0.743
MYB90 Arabidopsis thaliana AT1G66390 I 0.743
Bo6g099880 Brassica oleracea Bo6g099880 I 0.743
Bra004162 Brassica rapa Bra004162 I 0.743
PAP1 Arabidopsis lyrata fgenesh2_kg.1__4777__AT1G56650.1 I 0.743
ATMYB90 Arabidopsis lyrata scaffold_201358.1 I 0.743
MDP0000192051 Malus domestica MDP0000192051 I 0.743
Thhalv10019041m.g Eutrema salsugineum Thhalv10019041m.g I 0.743
MYB113 Arabidopsis thaliana AT1G66370 D 0.738
PRUPE_ppa010069mg Prunus persica PRUPE_ppa010069mg I 0.737
scaffold_201357.1 Arabidopsis lyrata scaffold_201357.1 I 0.737
Ciclev10013455m.g Citrus clementina Ciclev10013455m.g I 0.737
Bra001917 Brassica rapa Bra001917 I 0.733
Bo00835s060 Brassica oleracea Bo00835s060 I 0.732
Bra039763 Brassica rapa Bra039763 I 0.732
MTR_5g079290 Medicago truncatula MTR_5g079290 I 0.731
mgf019317m Mimulus guttatus mgf019317m I 0.731
Eucgr.H04157 Eucalyptus grandis Eucgr.H04157 I 0.731
GLYMA19G02980 Glycine max GLYMA19G02980 I 0.730
Pm025429 Prunus mume Pm025429 I 0.729
Pm031337 Prunus mume Pm031337 I 0.729
MTR_5g079220 Medicago truncatula MTR_5g079220 I 0.727
VIT_14s0006g01280 Vitis vinifera VIT_14s0006g01280 I 0.726
Cagra.0463s0008 Capsella grandiflora Cagra.0463s0008 I 0.726
MYB113 Arabidopsis lyrata fgenesh2_kg.2__869__AT1G66370.1 I 0.725
VIT_02s0033g00410 Vitis vinifera VIT_02s0033g00410 I 0.725
VIT_02s0033g00450 Vitis vinifera VIT_02s0033g00450 I 0.725
PK17827.1 Cannabis sativa PK17827.1 I 0.725
MTR_5g078950 Medicago truncatula MTR_5g078950 I 0.724
Cagra.0463s0007 Capsella grandiflora Cagra.0463s0007 I 0.722
PRUPE_ppa016711mg Prunus persica PRUPE_ppa016711mg I 0.717
Gorai.007G268800 Gossypium raimondii Gorai.007G268800 I 0.717
VIT_02s0033g00400 Vitis vinifera VIT_02s0033g00400 I 0.712
VIT_02s0033g00430 Vitis vinifera VIT_02s0033g00430 I 0.712
Lus10009130.g Linum usitatissimum Lus10009130.g I 0.712
Lus10028513.g Linum usitatissimum Lus10028513.g I 0.712
MTR_0001s0360 Medicago truncatula MTR_0001s0360 I 0.711
MTR_5g078860 Medicago truncatula MTR_5g078860 I 0.711
Lus10042522.g Linum usitatissimum Lus10042522.g I 0.710
MTR_5g078910 Medicago truncatula MTR_5g078910 I 0.709
Cagra.0463s0006 Capsella grandiflora Cagra.0463s0006 I 0.709
evm.TU.supercontig_51.67 Carica papaya evm.TU.supercontig_51.67 I 0.708
TCM_026054 Theobroma cacao TCM_026054 I 0.707
30128.m008730 Ricinus communis 30128.m008730 I 0.704
Eucgr.F02842 Eucalyptus grandis Eucgr.F02842 I 0.704
Eucgr.J01553 Eucalyptus grandis Eucgr.J01553 I 0.704
Eucgr.J01569 Eucalyptus grandis Eucgr.J01569 I 0.704
Eucgr.J01580 Eucalyptus grandis Eucgr.J01580 I 0.704
evm.TU.supercontig_116.38 Carica papaya evm.TU.supercontig_116.38 I 0.704
evm.TU.supercontig_2742.1 Carica papaya evm.TU.supercontig_2742.1 I 0.704
VIT_02s0033g00390 Vitis vinifera VIT_02s0033g00390 I 0.702
Gorai.013G118300 Gossypium raimondii Gorai.013G118300 I 0.702
GLYMA07G16980 Glycine max GLYMA07G16980 I 0.700
GLYMA18G41520 Glycine max GLYMA18G41520 I 0.700
scaffold_201356.1 Arabidopsis lyrata scaffold_201356.1 I 0.700
Eucgr.J01586 Eucalyptus grandis Eucgr.J01586 I 0.699
MTR_0197s0010 Medicago truncatula MTR_0197s0010 I 0.697
Ca_19630 Cicer arietinum Ca_19630 I 0.697
Carubv10020888m.g Capsella rubella Carubv10020888m.g I 0.696
MTR_5g078800 Medicago truncatula MTR_5g078800 I 0.694
MTR_5g079120 Medicago truncatula MTR_5g079120 I 0.694
Aquca_047_00006 Aquilegia coerulea Aquca_047_00006 I 0.692
VIT_14s0006g01340 Vitis vinifera VIT_14s0006g01340 I 0.691
Eucgr.J01576 Eucalyptus grandis Eucgr.J01576 I 0.691
fgenesh1_pg.C_scaffold_2000950 Arabidopsis lyrata fgenesh1_pg.C_scaffold_2000950 I 0.690
MTR_7g017260 Medicago truncatula MTR_7g017260 I 0.690
Eucgr.J01578 Eucalyptus grandis Eucgr.J01578 I 0.689
MDP0000478453 Malus domestica MDP0000478453 I 0.688
MTR_5g078930 Medicago truncatula MTR_5g078930 I 0.687
Lus10009129.g Linum usitatissimum Lus10009129.g I 0.687
Lus10028514.g Linum usitatissimum Lus10028514.g I 0.687
Eucgr.J01555 Eucalyptus grandis Eucgr.J01555 I 0.683
Eucgr.J01573 Eucalyptus grandis Eucgr.J01573 I 0.683
chr1.LjT44L17.240.nd Lotus japonicus chr1.LjT44L17.240.nd I 0.680
Cucsa.277570 Cucumis sativus Cucsa.277570 I 0.677
Eucgr.J02817 Eucalyptus grandis Eucgr.J02817 I 0.667
mgf022565m Mimulus guttatus mgf022565m I 0.666
Eucgr.J01574 Eucalyptus grandis Eucgr.J01574 I 0.661