Sb01g007130 (Sorghum bicolor)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 Sb01g007130 T279092_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
HHO6
M07024_2.00 		Arabidopsis thaliana
GAATCTNNDAT
ATHNNAGATTC		 Dap-seq
OMalley et al.(2016)
AT1G49560_col_a 		0.789 0.867
HHO6
M07025_2.00 		Arabidopsis thaliana
DGAATCTHNGATHCN
NGDATCNDAGATTCH		 Dap-seq
OMalley et al.(2016)
AT1G49560_colamp_a 		0.842 0.894
NIGT1
M02328_2.00 		Oryza sativa
NNKATHCNNN
NNNGDATMNN		 PBM
Weirauch et al.(2014)
pTH8646 		0.728 0.800
HHO3
M02289_2.00 		Arabidopsis thaliana
NWGATWCBNN
NNVGWATCWN		 PBM
Weirauch et al.(2014)
pTH7278 		0.720 0.800
HHO2
M02290_2.00 		Arabidopsis thaliana
NNKATHCNNN
NNNGDATMNN		 PBM
Weirauch et al.(2014)
pTH7115 		0.773 0.830
HHO3
M07016_2.00 		Arabidopsis thaliana
NNDHNNAAKATTCY
RGAATMTTNNDHNN		 Dap-seq
OMalley et al.(2016)
At1g25550_colamp_a 		0.773 0.830
HHO3
M07017_2.00 		Arabidopsis thaliana
HNNAAKATTCY
RGAATMTTNND		 Dap-seq
OMalley et al.(2016)
At1g25550_col 		0.720 0.800
HHO2
M07029_2.00 		Arabidopsis thaliana
AKATTCY
RGAATMT		 Dap-seq
OMalley et al.(2016)
At1g68670_colamp_a 		0.720 0.800
HHO2
M07030_2.00 		Arabidopsis thaliana
RDATYNNAGATTC
GAATCTNNRATHY		 Dap-seq
OMalley et al.(2016)
At1g68670_col 		0.720 0.800
PK19779.1
M02354_2.00 		Cannabis sativa
NNKATNCNNN
NNNGNATMNN		 PBM
Weirauch et al.(2014)
pTH9610 		0.679 0.778
PK14402.1
M02352_2.00 		Cannabis sativa
NDWGATTCSNN
NNSGAATCWHN		 PBM
Weirauch et al.(2014)
pTH9491 		0.678 0.822
EFM
M07044_2.00 		Arabidopsis thaliana
NNGAATATTCY
RGAATATTCNN		 Dap-seq
OMalley et al.(2016)
At2g03500_col_a 		0.674 0.800
EFM
M07045_2.00 		Arabidopsis thaliana
RGAATCHWAGATTC
GAATCTWDGATTCY		 Dap-seq
OMalley et al.(2016)
At2g03500_colamp_a 		0.674 0.800
HRS1
M02284_2.00 		Arabidopsis thaliana
AGATTCYN
NRGAATCT		 PBM
Weirauch et al.(2014)
pTH7118 		0.702 0.809
HRS1
M01068_2.00 		Arabidopsis thaliana
NAGATTCBNN
NNVGAATCTN		 PBM
Sullivan et al.(2014)
pTH7648 		0.702 0.809
HRS1
M07004_2.00 		Arabidopsis thaliana
NDDWWVNAAKATTCY
RGAATMTTNBWWHHN		 Dap-seq
OMalley et al.(2016)
At1g13300_col_a 		0.702 0.809
HHO5
M07112_2.00 		Arabidopsis thaliana
HNDAAGATTCH
DGAATCTTHND		 Dap-seq
OMalley et al.(2016)
AT4G37180_col_a 		0.669 0.830
HHO5
M07113_2.00 		Arabidopsis thaliana
NNDAAGATTCY
RGAATCTTHNN		 Dap-seq
OMalley et al.(2016)
AT4G37180_colamp_a 		0.669 0.830
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Sb01g007130.1 Myb 215 266
Sb01g007130.2 Myb 215 264

Links

Other Myb/SANT family TFs
Other Sorghum bicolor TFs

358 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
pros-1 Caenorhabditis elegans WBGene00000448 D
HCOI02128500 Haemonchus contortus HCOI02128500 I
Cmyd_10014540 Chelonia mydas Cmyd_10014540 I
LCUP011134 Lucilia cuprina LCUP011134 I
Sjc_0122310 Schistosoma japonicum Sjc_0122310 I
MCOS_0000195601 Mesocestoides corti MCOS_0000195601 I
L898_g8569 Steinernema monticolum L898_g8569 I
AALB003340 Anopheles albimanus AALB003340 I
AARA009757 Anopheles arabiensis AARA009757 I
L893_g28279 Steinernema glaseri L893_g28279 I
ACHR007729 Anopheles christyi ACHR007729 I
CGOC_0000822101 Cylicostephanus goldi CGOC_0000822101 I
ACUA003826 Anopheles culicifacies ACUA003826 I
ADIR006616 Anopheles dirus ADIR006616 I
AEPI001687 Anopheles epiroticus AEPI001687 I
CpipJ_CPIJ004052 Culex pipiens CpipJ_CPIJ004052 I
Cflo_00868--XP_392355.3_APIME Camponotus floridanus Cflo_00868--XP_392355.3_APIME I
AMAM006295 Anopheles maculatus AMAM006295 I
EVEC_0001110501 Enterobius vermicularis EVEC_0001110501 I
EEL_0000266401 Elaeophora elaphi EEL_0000266401 I
AMIN002618 Anopheles minimus AMIN002618 I
AQUA008561 Anopheles quadriannulatus AQUA008561 I
ASTEI07078 Anopheles stephensi ASTEI07078 I
PPAI010076 Phlebotomus papatasi PPAI010076 I
A_05794 Schistosoma haematobium A_05794 I
ACOC_0000703501 Angiostrongylus costaricensis ACOC_0000703501 I
ANCCAN_23624 Ancylostoma caninum ANCCAN_23624 I
ANCCAN_24706 Ancylostoma caninum ANCCAN_24706 I
ANCCEY_02877 Ancylostoma ceylanicum ANCCEY_02877 I
ANCDUO_15205 Ancylostoma duodenale ANCDUO_15205 I
ASIM_0001298301 Anisakis simplex ASIM_0001298301 I
nAv.1.0.1.g04749 Acanthocheilonema viteae nAv.1.0.1.g04749 I
TELCIR_22329 Teladorsagia circumcincta TELCIR_22329 I
ACYPI001696 Acyrthosiphon pisum ACYPI001696 I
TELCIR_21732 Teladorsagia circumcincta TELCIR_21732 I
BGIBMGA005084 Bombyx mori BGIBMGA005084 I
Bm5024 Brugia malayi Bm5024 I
DICVIV_00921 Dictyocaulus viviparus DICVIV_00921 I
CJA12444 Caenorhabditis japonica CJA12444 I
CPIJ004052 Culex quinquefasciatus CPIJ004052 I
DAPPUDRAFT_290533 Daphnia pulex DAPPUDRAFT_290533 I
ENSMEUG00000002316 Macropus eugenii ENSMEUG00000002316 I
prox2 Takifugu rubripes ENSTRUG00000018353 I
SVUK_0000405601 Strongylus vulgaris SVUK_0000405601 I
SMTD_0001301801 Schistosoma mattheei SMTD_0001301801 I
SMRZ_0000596101 Schistosoma margrebowiei SMRZ_0000596101 I
SBAD_0000068201 Soboliphyme baturini SBAD_0000068201 I
D918_02805 Trichuris suis D918_02805 I
GL11998 Drosophila persimilis FBgn0149606 I
PXEA_0002638601 Protopolystoma xenopodis PXEA_0002638601 I
D917_07791 Trichinella nativa D917_07791 I
nOo.2.0.1.g10265 Onchocerca ochengi nOo.2.0.1.g10265 I
LOAG_14553 Loa loa LOAG_14553 I
SINV18378 Solenopsis invicta SINV18378 I
nLs.2.1.2.g05095 Litomosoides sigmodontis nLs.2.1.2.g05095 I
NECAME_07738 Necator americanus NECAME_07738 I
NBR_0001988501 Nippostrongylus brasiliensis NBR_0001988501 I
YQE_10516 Dendroctonus ponderosae YQE_10516 I
ECPE_0000538001 Echinostoma caproni ECPE_0000538001 N
AFAF012033 Anopheles farauti AFAF012033 N
HDID_0000779001 Hymenolepis diminuta HDID_0000779001 N
nRc.2.0.1.g47399 Romanomermis culicivorax nRc.2.0.1.g47399 N
RSKR_0000081800 Rhabditophanes kr3021 RSKR_0000081800 N
T265_07444 Opisthorchis viverrini T265_07444 N
TsM_000259000 Taenia solium TsM_000259000 N
KGM_10139 Danaus plexippus KGM_10139 N
AAEL002769 Aedes aegypti AAEL002769 N
ACEP10073 Atta cephalotes ACEP10073 N
AGAP004052 Anopheles gambiae AGAP004052 N
CapteG2449 Capitella teleta CapteG2449 N
pros Drosophila virilis FBgn0028753 N
GA14403 Drosophila pseudoobscura FBgn0074431 N
GF16857 Drosophila ananassae FBgn0093877 N
GH21437 Drosophila grimshawi FBgn0128899 N
GI22696 Drosophila mojavensis FBgn0145423 N
GK11290 Drosophila willistoni FBgn0213301 N
ISCW008733 Ixodes scapularis ISCW008733 N
ECANG7_00279 Echinococcus canadensis ECANG7_00279 N
SMAR007154 Strigamia maritima SMAR007154 N
Smp_162760 Schistosoma mansoni Smp_162760 N
tetur02g12740 Tetranychus urticae tetur02g12740 N
Alligator_sinensis_CCG003422.1 Alligator sinensis Alligator_sinensis_CCG003422.1 N
SMU15028253 Schmidtea mediterranea SMU15028253 N
SMU15031649 Schmidtea mediterranea SMU15031649 N
AATE019368 Anopheles atroparvus AATE019368 N
ACOM033416 Anopheles coluzzii ACOM033416 N
AFUN011260 Anopheles funestus AFUN011260 N
AMEC020934 Anopheles melas AMEC020934 N
AMEM000031 Anopheles merus AMEM000031 N