CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Alligator_sinensis_CCG003422.1
(
Alligator sinensis
)
Prospero
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF05044 (HPD)
IPR007738
Alligator_sinensis_CCG003422.1
T316623_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Alligator_sinensis_CCG003422.1
Prospero
644
795
SLTPQHLKKAKLMFFYTRYPSATTLKAYFPDVRFSRSVTAQLIKWFSNFREFFYLQAERFSRQALSGGRAGPQGPSVTPACQLARVLGQHFNKSSDYQVPTSFLEVTQVAVREFSQAIAGGRDADPAWKKPIYRVISKLEANIPEAFRAPPG
Links
Other
Prospero
family TFs
Other
Alligator sinensis
TFs
20 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ACOC_0000703501
Angiostrongylus costaricensis
ACOC_0000703501
I
0.763
ANCCAN_23624
Ancylostoma caninum
ANCCAN_23624
I
0.760
ANCCAN_24706
Ancylostoma caninum
ANCCAN_24706
I
0.760
ANCCEY_02877
Ancylostoma ceylanicum
ANCCEY_02877
I
0.760
ANCDUO_15205
Ancylostoma duodenale
ANCDUO_15205
I
0.760
CGOC_0000822101
Cylicostephanus goldi
CGOC_0000822101
I
0.760
D918_02805
Trichuris suis
D918_02805
I
0.760
DICVIV_00921
Dictyocaulus viviparus
DICVIV_00921
I
0.760
NECAME_07738
Necator americanus
NECAME_07738
I
0.760
SVUK_0000405601
Strongylus vulgaris
SVUK_0000405601
I
0.760
HCOI02128500
Haemonchus contortus
HCOI02128500
I
0.755
D917_07791
Trichinella nativa
D917_07791
I
0.740
TELCIR_21732
Teladorsagia circumcincta
TELCIR_21732
I
0.731
TELCIR_22329
Teladorsagia circumcincta
TELCIR_22329
I
0.731
ENSCSAVG00000009510
Ciona savignyi
ENSCSAVG00000009510
N
0.727
ENSMEUG00000013465
Macropus eugenii
ENSMEUG00000013465
I
0.727
nOo.2.0.1.g10265
Onchocerca ochengi
nOo.2.0.1.g10265
I
0.720
WUBG_06449
Wuchereria bancrofti
WUBG_06449
I
0.714
LOAG_14553
Loa loa
LOAG_14553
I
0.714
SBAD_0000068201
Soboliphyme baturini
SBAD_0000068201
I
0.700