CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Traes_2DL_25FD0FFB4
(
Triticum aestivum
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00249 (Myb_DNA-binding)
IPR014778
Traes_2DL_25FD0FFB4
T280928_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
MYB107
M07061_2.00
Arabidopsis thaliana
NDDWDBBYYACCWAMYHH
DDRKTWGGTRRVVHWHHN
Dap-seq
OMalley et al.(2016)
MYB107_col_a
0.664
0.763
MYB107
M07062_2.00
Arabidopsis thaliana
WNBYYYACCWAMYH
DRKTWGGTRRRVNW
Dap-seq
OMalley et al.(2016)
MYB107_colamp_a
0.664
0.763
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Traes_2DL_25FD0FFB4.1
Myb
15
64
KGPWTEEEDKTLVEYIQKRGGNVGSWRGLPKATGLNRCGKSCRLRWTNYL
Traes_2DL_25FD0FFB4.1
Myb
70
115
RGNFTDDEERLIINLHASLGNKWSTIATHLEGRTDNEIKNYWNTHI
Links
Other
Myb/SANT
family TFs
Other
Triticum aestivum
TFs
116 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSCSAG00000000311
Chlorocebus sabaeus
ENSCSAG00000000311
N
ENSGGOG00000014327
Gorilla gorilla
ENSGGOG00000014327
N
ENSPANG00000017350
Papio anubis
ENSPANG00000017350
N