Cla019490 (Citrullus lanatus)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Cla019490 T283309_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB98
M02301_2.00 		Arabidopsis thaliana
NNGTAACGKMN
NKMCGTTACNN		 PBM
Weirauch et al.(2014)
pTH8148 		0.759 0.903
MYB98
M07108_2.00 		Arabidopsis thaliana
DWWWHGTAACGKWHD
HDWMCGTTACDWWWH		 Dap-seq
OMalley et al.(2016)
MYB98_col_a 		0.759 0.903
MYB118
M07087_2.00 		Arabidopsis thaliana
DHWDHRDMCGTTACDWW
WWHGTAACGKHYDHWDH		 Dap-seq
OMalley et al.(2016)
MYB118_col_a 		0.686 0.774
MYB118
M07088_2.00 		Arabidopsis thaliana
DWWWYGTAACGKHYR
YRDMCGTTACRWWWH		 Dap-seq
OMalley et al.(2016)
MYB118_colamp_a 		0.686 0.774
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cla019490 Myb 193 239
Cla019490 Myb 245 290

Links

Other Myb/SANT family TFs
Other Citrullus lanatus TFs

160 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
L804_06456 Cryptococcus gattii L804_06456 I
K437DRAFT_260666 Tilletiaria anomala K437DRAFT_260666 N
PaG_03817 Pseudozyma aphidis PaG_03817 N
PAN0_010d4157 Pseudozyma antarctica PAN0_010d4157 N
PSEUBRA_SCAF6g00685 Pseudozyma brasiliensis PSEUBRA_SCAF6g00685 N
sr13871 Sporisorium reilianum sr13871 N
UHOR_04457 Ustilago hordei UHOR_04457 N
UM02827 Ustilago maydis UM02827 N