Pm002704 (Prunus mume)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Pm002704 T283455_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB3R5
M07116_2.00 		Arabidopsis thaliana
NWWWWNTDRCCGTTR
YAACGGYHANWWWWN		 Dap-seq
OMalley et al.(2016)
MYB3R5_col_a 		0.794 0.879
Q948S5_TOBAC
M11074_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MYBA2_01 		0.688 0.764
PK12011.1
M01279_2.00 		Cannabis sativa
HAACGGHHNN
NNDDCCGTTD		 PBM
Lambert et al.(2019)
pTH11423 		0.685 0.771
PC-MYB1
M07110_2.00 		Arabidopsis thaliana
NDWWNTDRCCGTTRN
NYAACGGYHANWWHN		 Dap-seq
OMalley et al.(2016)
MYB3R1_col_a 		0.682 0.736
PC-MYB1
M07111_2.00 		Arabidopsis thaliana
DWHNTDRCCGTTR
YAACGGYHANDWH		 Dap-seq
OMalley et al.(2016)
MYB3R1_colamp_a 		0.682 0.736
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pm002704 Myb 59 105
Pm002704 Myb 111 157
Pm002704 Myb 163 208

Links

Other Myb/SANT family TFs
Other Prunus mume TFs

143 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
K443DRAFT_680951 Laccaria amethystina K443DRAFT_680951 N 0.000
estExt_fgenesh2_pg.C_130019 Heterobasidion annosum estExt_fgenesh2_pg.C_130019 N 0.000
SCLCIDRAFT_143714 Scleroderma citrinum SCLCIDRAFT_143714 N 0.000
PLEOSDRAFT_1068470 Pleurotus ostreatus PLEOSDRAFT_1068470 N 0.000
PISMIDRAFT_676173 Pisolithus microcarpus PISMIDRAFT_676173 N 0.000
PILCRDRAFT_539323 Piloderma croceum PILCRDRAFT_539323 N 0.000
PHLGIDRAFT_111699 Phlebiopsis gigantea PHLGIDRAFT_111699 N 0.000
PAXRUDRAFT_150343 Paxillus rubicundulus PAXRUDRAFT_150343 N 0.000
Moror_4437 Moniliophthora roreri Moror_4437 N 0.000
M408DRAFT_33395 Serendipita vermifera M408DRAFT_33395 N 0.000
M404DRAFT_126970 Pisolithus tinctorius M404DRAFT_126970 N 0.000
LACBIDRAFT_318097 Laccaria bicolor LACBIDRAFT_318097 N 0.000
AGABI2DRAFT_228126 Agaricus bisporus AGABI2DRAFT_228126 N 0.000
JAAARDRAFT_40663 Jaapia argillacea JAAARDRAFT_40663 N 0.000
HYDPIDRAFT_94787 Hydnomerulius pinastri HYDPIDRAFT_94787 N 0.000
HETIRDRAFT_461359 Heterobasidion irregulare HETIRDRAFT_461359 N 0.000
GYMLUDRAFT_41111 Gymnopus luxurians GYMLUDRAFT_41111 N 0.000
GLOTRDRAFT_65833 Gloeophyllum trabeum GLOTRDRAFT_65833 N 0.000
GALMADRAFT_243404 Galerina marginata GALMADRAFT_243404 N 0.000
FOMPIDRAFT_132509 Fomitopsis pinicola FOMPIDRAFT_132509 N 0.000
FIBRA_07513 Fibroporia radiculosa FIBRA_07513 N 0.000
DICSQDRAFT_60279 Dichomitus squalens DICSQDRAFT_60279 N 0.000
CY34DRAFT_736232 Suillus luteus CY34DRAFT_736232 N 0.000
CC1G_07334 Coprinopsis cinerea CC1G_07334 N 0.000