30076.m004682 (Ricinus communis)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 30076.m004682 T283867_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYBP_MAIZE
M11057_2.00 		Zea mays
ACCWACCHN
NDGGTWGGT		 Transfac
Matys et al.(2006)
P$P_01 		0.728 0.817
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
30076.m004682 Myb 14 61
30076.m004682 Myb 67 91

Links

Other Myb/SANT family TFs
Other Ricinus communis TFs

12 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
OB05G17240 Oryza brachyantha OB05G17240 I
BGIOSGA030113 Oryza indica BGIOSGA030113 I
ORGLA09G0026100 Oryza glaberrima ORGLA09G0026100 I
ONIVA09G03360 Oryza nivara ONIVA09G03360 I
Si028202m.g Setaria italica Si028202m.g I
TCM_019689 Theobroma cacao TCM_019689 I
OLONG_002978 Oryza longistaminata OLONG_002978 I
TCM_045556 Theobroma cacao TCM_045556 I
OGLUM11G00850 Oryza glumaepatula OGLUM11G00850 I
Traes_2AS_6269D889E Triticum aestivum Traes_2AS_6269D889E I
Traes_2BS_B65714572 Triticum aestivum Traes_2BS_B65714572 I
Cagra.0255s0014 Capsella grandiflora Cagra.0255s0014 I
Cagra.15225s0001 Capsella grandiflora Cagra.15225s0001 I
MLOC_71897 Hordeum vulgare MLOC_71897 I
Carubv10022162m.g Capsella rubella Carubv10022162m.g I
PDK_20s1314561g002 Phoenix dactylifera PDK_20s1314561g002 I
Pavir.J39511 Panicum virgatum Pavir.J39511 I
Pavir.Ha01933 Panicum virgatum Pavir.Ha01933 I
Pavir.Cb02194 Panicum virgatum Pavir.Cb02194 I
F775_25840 Aegilops tauschii F775_25840 I
Carubv10012720m.g Capsella rubella Carubv10012720m.g I
GRMZM2G441031 Zea mays GRMZM2G441031 I
GSMUA_Achr5G08580_001 Musa acuminata GSMUA_Achr5G08580_001 I
LPERR11G00960 Leersia perrieri LPERR11G00960 I
Carubv10021420m.g Capsella rubella Carubv10021420m.g I
LPERR12G01070 Leersia perrieri LPERR12G01070 I
OS12G0116700 Oryza sativa OS12G0116700 N
OPUNC12G00990 Oryza punctata OPUNC12G00990 N
Sb05g001180 Sorghum bicolor Sb05g001180 N
Sb08g002570 Sorghum bicolor Sb08g002570 N
OS12G0116600 Oryza sativa OS12G0116600 N
Si010764m.g Setaria italica Si010764m.g N
Si010832m.g Setaria italica Si010832m.g N
Si019098m.g Setaria italica Si019098m.g N
Si027360m.g Setaria italica Si027360m.g N
TRIUR3_26571 Triticum urartu TRIUR3_26571 N
Pavir.J34713 Panicum virgatum Pavir.J34713 N
OBART12G00850 Oryza barthii OBART12G00850 N
BGIOSGA034613 Oryza indica BGIOSGA034613 N
BGIOSGA036756 Oryza indica BGIOSGA036756 N
BGIOSGA036757 Oryza indica BGIOSGA036757 N
BRADI4G44370 Brachypodium distachyon BRADI4G44370 N
F775_02479 Aegilops tauschii F775_02479 N
GRMZM2G169564 Zea mays GRMZM2G169564 N
LPERR11G00970 Leersia perrieri LPERR11G00970 N
LPERR12G01080 Leersia perrieri LPERR12G01080 N
OB11G10760 Oryza brachyantha OB11G10760 N
OB12G11030 Oryza brachyantha OB12G11030 N
OBART11G01100 Oryza barthii OBART11G01100 N
OBART12G00840 Oryza barthii OBART12G00840 N
OS11G0117500 Oryza sativa OS11G0117500 N
OGLUM12G01400 Oryza glumaepatula OGLUM12G01400 N
OMERI11G01520 Oryza meridionalis OMERI11G01520 N
OMERI11G01570 Oryza meridionalis OMERI11G01570 N
ONIVA11G01050 Oryza nivara ONIVA11G01050 N
ONIVA11G01230 Oryza nivara ONIVA11G01230 N
OPUNC11G00970 Oryza punctata OPUNC11G00970 N
OPUNC11G00980 Oryza punctata OPUNC11G00980 N
ORGLA11G0201900 Oryza glaberrima ORGLA11G0201900 N
ORGLA12G0007500 Oryza glaberrima ORGLA12G0007500 N
ORGLA12G0007600 Oryza glaberrima ORGLA12G0007600 N
OS11G0117400 Oryza sativa OS11G0117400 N