CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Cucsa.157420
(
Cucumis sativus
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00249 (Myb_DNA-binding)
IPR014778
Cucsa.157420
T284443_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cucsa.157420.1
Myb
867
926
RNKWKPEEIKKLIKLRGELHDRFQVARGRMALWEEISNGMSADGINRSPGQCKSLWASLV
Links
Other
Myb/SANT
family TFs
Other
Cucumis sativus
TFs
13 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AMTR_s00009p00241540
Amborella trichopoda
AMTR_s00009p00241540
N
0.709
emb2746
Arabidopsis thaliana
AT5G63420
N
0.692
Bo3g103450
Brassica oleracea
Bo3g103450
N
0.713
Bra038629
Brassica rapa
Bra038629
N
0.713
GLYMA17G13780
Glycine max
GLYMA17G13780
N
0.703
MTR_3g089020
Medicago truncatula
MTR_3g089020
N
0.664
Cla019560
Citrullus lanatus
Cla019560
N
0.820
30147.m014528
Ricinus communis
30147.m014528
N
0.719
cassava17864.valid.m1
Manihot esculenta
cassava17864.valid.m1
N
0.680
Bostr.0568s0468
Boechera stricta
Bostr.0568s0468
N
0.713
Cagra.0248s0020
Capsella grandiflora
Cagra.0248s0020
N
0.712
Carubv10027519m.g
Capsella rubella
Carubv10027519m.g
N
0.712
Thhalv10003624m.g
Eutrema salsugineum
Thhalv10003624m.g
N
0.713