Cucsa.196850 (Cucumis sativus)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Cucsa.196850 T284458_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB98
M02301_2.00 		Arabidopsis thaliana
NNGTAACGKMN
NKMCGTTACNN		 PBM
Weirauch et al.(2014)
pTH8148 		0.758 0.903
MYB98
M07108_2.00 		Arabidopsis thaliana
DWWWHGTAACGKWHD
HDWMCGTTACDWWWH		 Dap-seq
OMalley et al.(2016)
MYB98_col_a 		0.758 0.903
MYB118
M07087_2.00 		Arabidopsis thaliana
DHWDHRDMCGTTACDWW
WWHGTAACGKHYDHWDH		 Dap-seq
OMalley et al.(2016)
MYB118_col_a 		0.683 0.763
MYB118
M07088_2.00 		Arabidopsis thaliana
DWWWYGTAACGKHYR
YRDMCGTTACRWWWH		 Dap-seq
OMalley et al.(2016)
MYB118_colamp_a 		0.683 0.763
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cucsa.196850.1 Myb 194 240
Cucsa.196850.1 Myb 246 291

Links

Other Myb/SANT family TFs
Other Cucumis sativus TFs

161 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ken Drosophila melanogaster FBgn0011236 D
AEPI010341 Anopheles epiroticus AEPI010341 I
CLEC002030 Cimex lectularius CLEC002030 I
HHAL010124-PA Halyomorpha halys HHAL010124-PA I
AALB007471 Anopheles albimanus AALB007471 I
AARA006017 Anopheles arabiensis AARA006017 I
AATE013052 Anopheles atroparvus AATE013052 I
ACHR008511 Anopheles christyi ACHR008511 I
ACOM038426 Anopheles coluzzii ACOM038426 I
ACUA025859 Anopheles culicifacies ACUA025859 I
ADIR009163 Anopheles dirus ADIR009163 I
PHUM427690 Pediculus humanus PHUM427690 I
AFAF004411 Anopheles farauti AFAF004411 I
AFUN010977 Anopheles funestus AFUN010977 I
AMAM010137 Anopheles maculatus AMAM010137 I
AMEC003483 Anopheles melas AMEC003483 I
AMEM009002 Anopheles merus AMEM009002 I
AMIN008106 Anopheles minimus AMIN008106 I
AQUA002615 Anopheles quadriannulatus AQUA002615 I
ASTEI08109 Anopheles stephensi ASTEI08109 I
GI18841 Drosophila mojavensis FBgn0141580 I
AAEL002474 Aedes aegypti AAEL002474 I
ADAC005598 Anopheles darlingi ADAC005598 I
AGAP004767 Anopheles gambiae AGAP004767 I
CPIJ016082 Culex quinquefasciatus CPIJ016082 I
ken Drosophila yakuba FBgn0067962 I
ken Drosophila pseudoobscura FBgn0078979 I
GF12868 Drosophila ananassae FBgn0089902 I
GG22895 Drosophila erecta FBgn0115052 I
GH21687 Drosophila grimshawi FBgn0129148 I
Hsal_07497--XP_623760.2_APIME Harpegnathos saltator Hsal_07497--XP_623760.2_APIME I
GL11171 Drosophila persimilis FBgn0148781 I
GM16054 Drosophila sechellia FBgn0170970 I
GJ21870 Drosophila virilis FBgn0208987 I
GK15862 Drosophila willistoni FBgn0217865 I
GB50874 Apis mellifera GB50874 I
L798_12553 Zootermopsis nevadensis L798_12553 I
MESCA008027 Megaselia scalaris MESCA008027 I
CpipJ_CPIJ016082 Culex pipiens CpipJ_CPIJ016082 I