Cucsa.198920 (Cucumis sativus)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Cucsa.198920 T284463_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK19621.1
M01280_2.00 		Cannabis sativa
NNTTATCYN
NRGATAANN		 PBM
Lambert et al.(2019)
pTH10140 		0.687 0.815
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cucsa.198920.1 Myb 5 61
Cucsa.198920.1 Myb 142 187

Links

Other Myb/SANT family TFs
Other Cucumis sativus TFs

17 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PK19621.1 Cannabis sativa PK19621.1 D 0.687
Cla019277 Citrullus lanatus Cla019277 I 0.849
chr4.LjB15O07.50.nc Lotus japonicus chr4.LjB15O07.50.nc I 0.677
MDP0000853568 Malus domestica MDP0000853568 I 0.701
gene26214-v1.0-hybrid Fragaria vesca gene26214-v1.0-hybrid I 0.690
Eucgr.K02659 Eucalyptus grandis Eucgr.K02659 I 0.676
30174.m008717 Ricinus communis 30174.m008717 I 0.684
Pm030197 Prunus mume Pm030197 I 0.734
GLYMA05G07980 Glycine max GLYMA05G07980 I 0.690
Ca_06612 Cicer arietinum Ca_06612 I 0.677
VIT_17s0000g04130 Vitis vinifera VIT_17s0000g04130 I 0.669
TCM_012262 Theobroma cacao TCM_012262 I 0.683
Solyc03g119740.2 Solanum lycopersicum Solyc03g119740.2 I 0.665
PRUPE_ppa009092mg Prunus persica PRUPE_ppa009092mg I 0.734
MTR_4g111975 Medicago truncatula MTR_4g111975 I 0.684
GLYMA17G13010 Glycine max GLYMA17G13010 I 0.710
MDP0000241185 Malus domestica MDP0000241185 N 0.748