gw1.49.140.1 (Volvox carteri)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 gw1.49.140.1 T285118_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
gw1.49.140.1 Myb 6 56

Links

Other Myb/SANT family TFs
Other Volvox carteri TFs

38 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
evm.TU.supercontig_46.117 Carica papaya evm.TU.supercontig_46.117 I 0.665
AMTR_s00101p00128190 Amborella trichopoda AMTR_s00101p00128190 I 0.671
gw1.27.80.1 Physcomitrella patens gw1.27.80.1 I 0.671
gw1.29.164.1 Physcomitrella patens gw1.29.164.1 I 0.671
gw1.29.165.1 Physcomitrella patens gw1.29.165.1 I 0.671
mgf001591m Mimulus guttatus mgf001591m I 0.665
mgf014863m Mimulus guttatus mgf014863m I 0.665
Ciclev10007648m.g Citrus clementina Ciclev10007648m.g I 0.677
Eucgr.C00380 Eucalyptus grandis Eucgr.C00380 I 0.665
EuGene.0600010100 Micromonas sp RCC299 EuGene.0600010100 I 0.671
gw1.12.455.1 Ostreococcus RCC809 gw1.12.455.1 I 0.705
gene15029-v1.0-hybrid Fragaria vesca gene15029-v1.0-hybrid I 0.692
Gorai.009G054200 Gossypium raimondii Gorai.009G054200 I 0.665
orange1.1g005719m.g Citrus sinensis orange1.1g005719m.g I 0.677
SapurV1A.0159s0180 Salix purpurea SapurV1A.0159s0180 I 0.671
SapurV1A.1916s0020 Salix purpurea SapurV1A.1916s0020 I 0.671
PK09202.1 Cannabis sativa PK09202.1 I 0.777
1200010147 Ostreococcus tauri 1200010147 I 0.663
chr6.CM0037.920.nc Lotus japonicus chr6.CM0037.920.nc I 0.668
POPTR_0016s03240 Populus trichocarpa POPTR_0016s03240 I 0.671
CHLREDRAFT_130971 Chlamydomonas reinhardtii CHLREDRAFT_130971 I 0.786
GLYMA05G34516 Glycine max GLYMA05G34516 I 0.728
OSTLU_26838 Ostreococcus lucimarinus OSTLU_26838 I 0.705
PGSC0003DMG400003196 Solanum tuberosum PGSC0003DMG400003196 I 0.665
PGSC0003DMG400007823 Solanum tuberosum PGSC0003DMG400007823 I 0.683
POPTR_0006s03340 Populus trichocarpa POPTR_0006s03340 I 0.671
gw1.104.128.1 Physcomitrella patens gw1.104.128.1 I 0.671
PRUPE_ppa018934mg Prunus persica PRUPE_ppa018934mg I 0.665
SELMODRAFT_36646 Selaginella moellendorffii SELMODRAFT_36646 I 0.671
Solyc07g005140.2 Solanum lycopersicum Solyc07g005140.2 I 0.665
Solyc12g010330.1 Solanum lycopersicum Solyc12g010330.1 I 0.683
VIT_11s0206g00060 Vitis vinifera VIT_11s0206g00060 I 0.665
Pm027701 Prunus mume Pm027701 I 0.665
EuGene.0000090108 Micromonas pusilla EuGene.0000090108 I 0.671
Traes_1AL_43D709979 Triticum aestivum Traes_1AL_43D709979 N 0.667
MTR_2g450070 Medicago truncatula MTR_2g450070 N 0.678
Thhalv10022243m.g Eutrema salsugineum Thhalv10022243m.g N 0.725
GLYMA08G05165 Glycine max GLYMA08G05165 N 0.698