Bostr.2021s0106 (Boechera stricta)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Bostr.2021s0106 T285748_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ATMYB121
M07091_2.00 		Arabidopsis thaliana
NYNWACCTAMYHHH
DDDRKTAGGTWNRN		 Dap-seq
OMalley et al.(2016)
MYB121_col_a 		0.757 0.806
MYB62
M07027_2.00 		Arabidopsis thaliana
NHRCCTAAYTWNHNN
NNDNWARTTAGGYDN		 Dap-seq
OMalley et al.(2016)
MYB62_col_a 		0.727 0.720
MYB62
M07028_2.00 		Arabidopsis thaliana
HNKRCCTAACTHH
DDAGTTAGGYMND		 Dap-seq
OMalley et al.(2016)
MYB62_colamp_a 		0.727 0.720
MYB116
M07014_2.00 		Arabidopsis thaliana
NRCCTAAYTWNWNNN
NNNWNWARTTAGGYN		 Dap-seq
OMalley et al.(2016)
MYB116_col_a 		0.708 0.688
MYB116
M07015_2.00 		Arabidopsis thaliana
HNTRCCTAACTHH
DDAGTTAGGYAND		 Dap-seq
OMalley et al.(2016)
MYB116_colamp_a 		0.708 0.688
MYB59
M00883_2.00 		Arabidopsis thaliana
NKACCTAAYN
NRTTAGGTMN		 PBM
Franco-Zorrilla et al.(2014)
MYB59 		0.673 0.710
MYB05_ANTMA
M11067_2.00 		Antirrhinum majus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MYB305_Q3 		0.669 0.753
MYB108
M07065_2.00 		Arabidopsis thaliana
RCCWAAYYNNNNHNH
DNDNNNNRRTTWGGY		 Dap-seq
OMalley et al.(2016)
BOS1_col_a 		0.666 0.699
MYB24
M02311_2.00 		Arabidopsis thaliana
RCCDAMYNN
NNRKTHGGY		 PBM
Weirauch et al.(2014)
pTH8662 		0.664 0.731
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bostr.2021s0106.1.p Myb 20 67
Bostr.2021s0106.1.p Myb 73 118

Links

Other Myb/SANT family TFs
Other Boechera stricta TFs

543 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
TRIUR3_32168 Triticum urartu TRIUR3_32168 I
Traes_2BL_9CD6E043A Triticum aestivum Traes_2BL_9CD6E043A I
ONIVA02G22690 Oryza nivara ONIVA02G22690 N
Sb04g022943 Sorghum bicolor Sb04g022943 N
OS02G0558700 Oryza sativa OS02G0558700 N
ORUFI04G15010 Oryza rufipogon ORUFI04G15010 N
ORUFI02G21740 Oryza rufipogon ORUFI02G21740 N
ORGLA04G0108200 Oryza glaberrima ORGLA04G0108200 N
OPUNC02G18630 Oryza punctata OPUNC02G18630 N
ONIVA04G11950 Oryza nivara ONIVA04G11950 N
BGIOSGA006249 Oryza indica BGIOSGA006249 N
OMERI04G12360 Oryza meridionalis OMERI04G12360 N
OMERI02G20440 Oryza meridionalis OMERI02G20440 N
OGLUM02G20980 Oryza glumaepatula OGLUM02G20980 N
OB02G28310 Oryza brachyantha OB02G28310 N
LPERR04G10650 Leersia perrieri LPERR04G10650 N
LPERR02G16700 Leersia perrieri LPERR02G16700 N
GRMZM2G139740 Zea mays GRMZM2G139740 N
BRADI3G45997 Brachypodium distachyon BRADI3G45997 N