CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GRMZM2G139740
(
Zea mays
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00847 (AP2)
IPR001471
GRMZM2G139740
T002180_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GRMZM2G139740_P01
AP2
24
75
PQYRGVRRRKWGKWVSEIRQPGTKVRVWLGSFDSAEAAAVAHDVAALCMRGP
Links
Other
AP2
family TFs
Other
Zea mays
TFs
17 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GRMZM2G087040
Zea mays
GRMZM2G087040
N
0.816
Sb04g022943
Sorghum bicolor
Sb04g022943
N
0.816
BGIOSGA006249
Oryza indica
BGIOSGA006249
N
0.721
LPERR02G16700
Leersia perrieri
LPERR02G16700
N
0.721
OB02G28310
Oryza brachyantha
OB02G28310
N
0.721
OGLUM02G20980
Oryza glumaepatula
OGLUM02G20980
N
0.721
OMERI02G20440
Oryza meridionalis
OMERI02G20440
N
0.721
ONIVA02G22690
Oryza nivara
ONIVA02G22690
N
0.721
ORUFI02G21740
Oryza rufipogon
ORUFI02G21740
N
0.721
OS02G0558700
Oryza sativa
OS02G0558700
N
0.721
OPUNC02G18630
Oryza punctata
OPUNC02G18630
N
0.707
BRADI3G45997
Brachypodium distachyon
BRADI3G45997
N
0.705
LPERR04G10650
Leersia perrieri
LPERR04G10650
N
0.697
OMERI04G12360
Oryza meridionalis
OMERI04G12360
N
0.696
ONIVA04G11950
Oryza nivara
ONIVA04G11950
N
0.696
ORGLA04G0108200
Oryza glaberrima
ORGLA04G0108200
N
0.696
ORUFI04G15010
Oryza rufipogon
ORUFI04G15010
N
0.696