CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

Eucgr.H02312 *(Eucalyptus grandis)* Myb/SANT
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source
PF00249 (Myb_DNA-binding)	IPR014778	Eucgr.H02312	T286908_2.00	JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
PK06103.1 M02348_2.00	Cannabis sativa	TGCCCTAG	CTAGGGCA	PBM Weirauch et al.(2014) pTH9649	0.888	0.957
TRB2 M02314_2.00	Arabidopsis thaliana	WRMCCTAR	YTAGGKYW	PBM Weirauch et al.(2014) pTH7094	0.736	0.851
TRB2 M01083_2.00	Arabidopsis thaliana	HRMCCTAR	YTAGGKYD	PBM Sullivan et al.(2014) pTH7260	0.736	0.851
TRB2 M07157_2.00	Arabidopsis thaliana	HHHHHNWWRCCCTAAWHHN	NDDWTTAGGGYWWNDDDDD	Dap-seq OMalley et al.(2016) TBP3_col_a	0.736	0.851
TRB2 M07158_2.00	Arabidopsis thaliana	HVDHHHNWARCCCTAAHYH	DRDTTAGGGYTWNDDDHBD	Dap-seq OMalley et al.(2016) TBP3_colamp_a	0.736	0.851
estExt_fgenesh1_pg.C_Chr_13.00010057 M02366_2.00	Ostreococcus tauri	NRMCCTANN	NNTAGGKYN	PBM Weirauch et al.(2014) pTH9424	0.714	0.660
TRB1 M01070_2.00	Arabidopsis thaliana	WRMCCTAR	YTAGGKYW	PBM Sullivan et al.(2014) pTH7117	0.711	0.809
AT1G72740 M07033_2.00	Arabidopsis thaliana	HMNAAACCCTAAWYY	RRWTTAGGGTTTNKD	Dap-seq OMalley et al.(2016) AT1G72740_col_a	0.663	0.702
AT1G72740 M07034_2.00	Arabidopsis thaliana	HNWAACCCTAAHYHNNNHNNN	NNNDNNNDRDTTAGGGTTWND	Dap-seq OMalley et al.(2016) AT1G72740_colamp_a	0.663	0.702
For this family, TFs with SR scores > 0.661* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
Eucgr.H02312.1	Myb	5	57	KQKWTAEEEAALKAGVIKHGAGKWRTILTDLEFKEILKMRSNVDLKDKWRNIN
Eucgr.H02312.2	Myb	5	57	KQKWTAEEEAALKAGVIKHGAGKWRTILTDLEFKEILKMRSNVDLKDKWRNIN
Eucgr.H02312.3	Myb	5	57	KQKWTAEEEAALKAGVIKHGAGKWRTILTDLEFKEILKMRSNVDLKDKWRNIN

Links
Other Myb/SANT family TFs
Other *Eucalyptus grandis* TFs

191 Related TFs

Name	Species	Gene ID	Motif Evidence	SR Score	Action
PGUG_03333	Candida guilliermondii	PGUG_03333	N
CaO19.11621	Candida albicans	CaO19.11621	N
CD36_50850	Candida dubliniensis	CD36_50850	N
CFIO01_10585	Colletotrichum fioriniae	CFIO01_10585	N
CTRG_02684	Candida tropicalis	CTRG_02684	N
DEHA2E13398g	Debaryomyces hansenii	DEHA2E13398g	N
G210_1563	Candida maltosa	G210_1563	N
GNLVRS01_PISO0N18207g	Millerozyma farinosa	GNLVRS01_PISO0N18207g	N
PGUG_03333	Meyerozyma guilliermondii	PGUG_03333	N